Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0056 ATGGGTTGGAGATGTTGGTGTGTGGTTCTGGTTGTTGTTCTTCTTCAACCGCTCATAGATTCTGCTTCTGCGAGCTCCATTGTTAAGAACCTACCGGGTTATGACGGCCATCTTCCATTCAACCTTGAAACCGGATATGTAGGGGTTGGGGAGGAGGAAGCTGTGCAATTATTTTACTTGTTTGTGGAATCTGAAAGAAATCCTTTATTTGATCCACTTCTGCTCTGGTTTGTTGGAGGTCCTGGTTGCTCTGCACTTTCTGCATTCTTTTTCGAAAATGGACCTCTAAGAATGGATCGAAATTTGAGTGGAAATATTCCAAAACTTGAGCTGAACCCATACTCATGGACCCATATGTTGAACATGTTATACATAGATATCCCAGTGGGCACTGGATTTTCTTACTCAAAAACGCAAGAAGGTTACTATAGTAGTGACACATTATGGGTTGACCATACGTATGCTTTTCTACAAAAGTGGTTTATTGATCATCCAAAGTTCAACTCAAATCCATTTTACGTTGGTGGTGGCTCGTATTCAGGATCTCCTACTGCTCCTCTCGTTCAAAAATTATATGATGGTTACGTAGCAGGTCGTGTACCACGCATTAATATCAAGGGTTATGTGATTGCAAGCCCAGCGGTGGATGCATATGAGAGCGAGAACACGAAAGTGTTGTATGCATACCAGATGTCTCTCGTACCAGAATTACTCTATCAGTCGATAAAAGAACATTGTGGTGGTAATTATGTAAATATTGATCCAGAAAACACAAAGTGTGTTTCAGATTATGAAGCTTATTCCGAGTTAGTTCGTTACATAAATCCACAACAAATTTTGGAACCTTTGTGTGAAACGACACCTGGTGTGAATCATGGAATTTTACAATCCTCACTTCAACATCCTTCAGAATTTTGGTGTAGAAGTTATTCTCACATTCTTGTGGACACATGGGCAAATGATCAAAGTGTGAGGAAAGCCTTGTACATTAGAGAGGGAACTAAAGGAGAGTTCTTGAGATGCAACAAAACTTTGGCATATAACGTCACTCTACTCAGCGTTGCAGGATATTATCAAAATTTGACCAAGGCCAACATCCAAGCTCTAGTTTACTGTTCTGATCTTGATATGTCGATACCACACATAGCTACACAAAATTGGATAAAGTCATTAAAGCTTAGCATATATGACAAGTGGCGTGCATGGTTTGTTGATGGTCAAGTGGCCGGATTTACGGAAATTTACAAAATGAAAGAAGACCATTACTTAACATATGTGTCAGTAAAGGGTGCTGGACATGTAGCCCAGACATTTAAACCCAAGGAAGTTTACCATATGATAAAGAGGTGGTTTTCATATTCTCTTATATAA 1371 0.3961 MGWRCWCVVLVVVLLQPLIDSASASSIVKNLPGYDGHLPFNLETGYVGVGEEEAVQLFYLFVESERNPLFDPLLLWFVGGPGCSALSAFFFENGPLRMDRNLSGNIPKLELNPYSWTHMLNMLYIDIPVGTGFSYSKTQEGYYSSDTLWVDHTYAFLQKWFIDHPKFNSNPFYVGGGSYSGSPTAPLVQKLYDGYVAGRVPRINIKGYVIASPAVDAYESENTKVLYAYQMSLVPELLYQSIKEHCGGNYVNIDPENTKCVSDYEAYSELVRYINPQQILEPLCETTPGVNHGILQSSLQHPSEFWCRSYSHILVDTWANDQSVRKALYIREGTKGEFLRCNKTLAYNVTLLSVAGYYQNLTKANIQALVYCSDLDMSIPHIATQNWIKSLKLSIYDKWRAWFVDGQVAGFTEIYKMKEDHYLTYVSVKGAGHVAQTFKPKEVYHMIKRWFSYSLI* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0056 456 Gene3D alpha/beta hydrolase 21 293 IPR029058 -
Ahy4g0056 456 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 454 IPR001563 GO:0004185|GO:0006508
Ahy4g0056 456 Pfam Serine carboxypeptidase 32 452 IPR001563 GO:0004185|GO:0006508
Ahy4g0056 456 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 10 454 - -
Ahy4g0056 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Ahy4g0056 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Ahy4g0056 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Ahy4g0056 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 423 436 IPR001563 GO:0004185|GO:0006508
Ahy4g0056 456 Gene3D - 307 454 - -
Ahy4g0056 456 SUPERFAMILY alpha/beta-Hydrolases 28 452 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0056 Ahy-Chr4 602076 626017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0056 318 452 Calmodulin-binding Proteins AT2G22960 41.481 7.01e-34 124