Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0052 ATGAGTACAATGACGAATAAGTGTGATGGTCGGAAAGTCTCCAAGGTTCGCCGCCCATCCTCATCGGTTGAAGAGGATAGTGGTGAAAGTACCGTTGGAGGAGAAGGTCATTTAAAGAAAGGTCCTTGGACCACAGCAGAGGATGCAATTTTAGTAGATTATGTCAAGAAGAATGGAGAAGGGAATTGGAATGCAGTTCAAAGGCATTCAGGACTTGCCAGATGCGGAAAAAGTTGTCGTTTACGGTGGGCAAATCATTTGAGACCAGATTTAAGAAAGGGCGCATTCACCGAAGAAGAAGAGCGCCGGATCATTGAGCTTCATGCTAAGATGGGAAACAAATGGGCACGGATGGCTGCAGAGTTGCCTGGGCGTACAGACAATGAGATAAAGAACTATTGGAACACGAGAATTAAAAGAATGCAGCGAGCTGGTCTACCAATCTACCCTCCTGATGTATGCCTGCGGGTGATGCATGGCAATCAAGAAAGTGTAAATGTTGGTACCTTGAGAGATGAAGCCAACCAGCATGATGATCTCTCACAGACAGATACTCTGGATATACCGGAGTTAGATTTCAAACTAGTCAAACTCTGTCCAGGTTTATCTTATGGAACATCAATTTGTGATATACCTGAAAGTAGCATGGTTGAAATGAGTTCGGACTCGTCCCATGGTTACAATCACATGTTTCCTGTGATGCCTCCTTCGAAACGCCTTCGAGAATCAGACATGCAATATGGATATTTGGACAGTTGTATCAGTGATACTGTCCCAATATTTGAACAGTATGGTGATTACACGTGTGATAAAATTTCCGACCATACTCAATTGTCTTCTCCATGTGATCCTATTCTAAACACCAGCGATCAGTTTCATGGTGATGACACATATGGTAGCCATGCTCCCTTAAATGGCAATACTTCTTCTTCTTCTGTGCCCCTACCCGGGGCCATGAAGTTGGAGCTCCCTTCACTCCAATATTTTGAAACTCAACACGGTATCTGGGGCACACCTGCTTCCCCACTTCCCTCACTTGAGTCCGTTGACACGATGATCCAGTCTCCGCCGGCCAAGCCGTCTCCTTCGGATCCTGTTTCTCCAGAGAGGAGCGGTTTGCTGGAAGCAATAATCTACCAGCCGAAGCAGTTACAAGTGGCGAATAACAATTCACTTCAAGCAACACCCAATGATTGTATTCACAAAGAAGTTAAGATTTCAACCATGAAGTGTAAGCCAGAATGCGATGAACAAGGCGGGCCGCATTTCCCCTTAGATCATAATATTAAGCAAGAACTAGGCACACAGTACCCAGCTTACGTGTCTGGGAAGAAAGAAAACTGGAATCAAATAGACTTCACACGGCCCGATGCTTTACTCGACTTGGGTTGGTTTGGGAGTGGCATCGATTGCCACGATTATGATGGCGATCAGTTTCTTTTCAAAGATGCTTTAAGCCCATTTCTTGGTCAAGATCCGGATGGTTAG 1488 0.4509 MSTMTNKCDGRKVSKVRRPSSSVEEDSGESTVGGEGHLKKGPWTTAEDAILVDYVKKNGEGNWNAVQRHSGLARCGKSCRLRWANHLRPDLRKGAFTEEEERRIIELHAKMGNKWARMAAELPGRTDNEIKNYWNTRIKRMQRAGLPIYPPDVCLRVMHGNQESVNVGTLRDEANQHDDLSQTDTLDIPELDFKLVKLCPGLSYGTSICDIPESSMVEMSSDSSHGYNHMFPVMPPSKRLRESDMQYGYLDSCISDTVPIFEQYGDYTCDKISDHTQLSSPCDPILNTSDQFHGDDTYGSHAPLNGNTSSSSVPLPGAMKLELPSLQYFETQHGIWGTPASPLPSLESVDTMIQSPPAKPSPSDPVSPERSGLLEAIIYQPKQLQVANNNSLQATPNDCIHKEVKISTMKCKPECDEQGGPHFPLDHNIKQELGTQYPAYVSGKKENWNQIDFTRPDALLDLGWFGSGIDCHDYDGDQFLFKDALSPFLGQDPDG* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0052 495 SMART sant 92 140 IPR001005 -
Ahy4g0052 495 SMART sant 39 89 IPR001005 -
Ahy4g0052 495 ProSiteProfiles Myb-like domain profile. 35 87 IPR001005 -
Ahy4g0052 495 Gene3D - 39 92 - -
Ahy4g0052 495 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 142 IPR017930 -
Ahy4g0052 495 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 87 IPR017930 -
Ahy4g0052 495 Gene3D - 95 166 - -
Ahy4g0052 495 CDD SANT 42 87 IPR001005 -
Ahy4g0052 495 SUPERFAMILY Homeodomain-like 38 134 IPR009057 -
Ahy4g0052 495 MobiDBLite consensus disorder prediction 1 41 - -
Ahy4g0052 495 ProSiteProfiles Myb-like domain profile. 88 138 IPR001005 -
Ahy4g0052 495 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 1 429 - -
Ahy4g0052 495 MobiDBLite consensus disorder prediction 339 369 - -
Ahy4g0052 495 MobiDBLite consensus disorder prediction 291 311 - -
Ahy4g0052 495 CDD SANT 107 136 IPR001005 -
Ahy4g0052 495 MobiDBLite consensus disorder prediction 10 24 - -
Ahy4g0052 495 PANTHER TRANSCRIPTION FACTOR, PUTATIVE-RELATED 1 429 - -
Ahy4g0052 495 Pfam Myb-like DNA-binding domain 40 87 IPR001005 -
Ahy4g0052 495 Pfam Myb-like DNA-binding domain 93 136 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0052 Ahy-Chr4 576197 582993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0052 35 492 MYB Transcription Factor Family AT5G06100 40.558 2.19e-94 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy4g0052 Myb_DNA-binding 3.90E-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0052 K09422 - gmx:100800658 591.267