Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0038 ATGGGCAATTGTTGCTCCCAAGGCAACGCCGCAGATGCCCCGGAGGCCGACAATGCGGCCACCGCAACCAAGGGAGACTCAAACCAACAACAAACCACAGACAATAATGGAGGCACCGACAACAATAATAATAATAATAACAACAATGAAAGCCCATCCACAAGCCCTCCGGCCAGCAAGCCTCCACCACCCTCAACTACATCTCCTCCGTCAACAACAAAACCCACAAAGCCCGGGCCTATCGGGCCCGTGCTGGGGAGGCCAATGGAGGACATCAAAGCGTCATATAGTCTGGGTAAGGAGCTAGGTAGAGGCATGTTTGGGGTAACATATTTATGCACCCACAAGGCAACAGGAAAACAATTTGCATGCAAAACAATTGCGAAGAGGAAGCTAGTGAATAAGGAGGATATAGAGGACGTTAGAAGGGAGGTGCAGATCTTGTACCACCTGTCAGGGCAGCCTAACATCGTAGAGCTGAAAGGTGCCTACGAGGACAAACAATCTGTTCATTTAGTGATGGAATTGTGTGCGGGTGGTGAACTCTTTGATCGTATCATTGCCAAGGGACACTATACGGAGCGTGCCGCTGCTACCTTGTTAAGAACCATTATGGAGATTGTCCACACTTTTCACTCTCTTGGTGTCATTCATAGAGATCTCAAGCCTGAGAATTTCCTCTTGTTGAGCAAGGACGAAGATGCTCCCCTTAAAGCCACGGATTTTGGTTTATCCGTTTTTTACAAGCAAGGAGATGTTTTCAAAGACATTGTTGGTAGTGCATACTACATTGCACCTGAAGTATTGAAAAGGAAATATGGTCCAGAGGTTGATATATGGAGTGTTGGTGTTATGCTATACATTCTTTTATGTGGAGTTCCTCCATTTTGGGCAGAATCTGAACATGGCATATTCAATGCCATCCTAAGAGGTCACGTTGACTTTTCAAGCGATCCATGGCCTTCAATTTCACCATCAGCAAAAGATCTTGTACGAAAAATGTTGAATTCAGATCCTAAACAAAGGCTTACAGCTTATGAAGTTTTGAATCATCCTTGGGTTAAGGAAGATGGAGAAGCACCAGATAAGCCTATTGATAATGCTGTGCTAAGTAGGCTCAAACAATTCAAAGCAATGAATGAATTCAAGAAAGTTGCTTTAAGGGTTATTGCAGGATGTTTATCAGAAGAAGAAATTATGGGGTTAAAGGAAATGTTTAAGGGAATGGACACTGATAATAGTGGAACCATTACAATTGAAGAACTTAAGCAGGGGCTTGCAAAGCAAGGGACAAAGCTATCAGAACAAGAAGTTCAACAATTACTGGATGCAGCAGATGCTGATGGAAATGGTACCATAGACTATGATGAATTCATCACAGCAACAGTGCACATGAACAGAATGAACAGAGAAGAACATCTTTATAAAGCCTTCCAATACTTTGATAAAGATAATAGCGGGTTTATCACCACTGAAGAATTAGAGCAAGCTCTCCATGAATATAACATCCACGATGGAAGAGACATCAATGAAATCGTTCAAGAAGTTGATGTAGATAACGATGGTCGTATTAACTATGAAGAGTTTGTGGCAATGATGAGAAAAGGACAAGCTGAAGCTCATACAAAAAAGAGACGTGAATCACTTAATTTGCATCAATAG 1662 0.4248 MGNCCSQGNAADAPEADNAATATKGDSNQQQTTDNNGGTDNNNNNNNNNESPSTSPPASKPPPPSTTSPPSTTKPTKPGPIGPVLGRPMEDIKASYSLGKELGRGMFGVTYLCTHKATGKQFACKTIAKRKLVNKEDIEDVRREVQILYHLSGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAATLLRTIMEIVHTFHSLGVIHRDLKPENFLLLSKDEDAPLKATDFGLSVFYKQGDVFKDIVGSAYYIAPEVLKRKYGPEVDIWSVGVMLYILLCGVPPFWAESEHGIFNAILRGHVDFSSDPWPSISPSAKDLVRKMLNSDPKQRLTAYEVLNHPWVKEDGEAPDKPIDNAVLSRLKQFKAMNEFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITIEELKQGLAKQGTKLSEQEVQQLLDAADADGNGTIDYDEFITATVHMNRMNREEHLYKAFQYFDKDNSGFITTEELEQALHEYNIHDGRDINEIVQEVDVDNDGRINYEEFVAMMRKGQAEAHTKKRRESLNLHQ* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0038 553 SMART efh_1 508 536 IPR002048 GO:0005509
Ahy4g0038 553 SMART efh_1 401 429 IPR002048 GO:0005509
Ahy4g0038 553 SMART efh_1 437 465 IPR002048 GO:0005509
Ahy4g0038 553 SMART efh_1 473 501 IPR002048 GO:0005509
Ahy4g0038 553 ProSitePatterns Protein kinases ATP-binding region signature. 102 129 IPR017441 GO:0005524
Ahy4g0038 553 ProSiteProfiles EF-hand calcium-binding domain profile. 397 432 IPR002048 GO:0005509
Ahy4g0038 553 SUPERFAMILY Protein kinase-like (PK-like) 95 359 IPR011009 -
Ahy4g0038 553 ProSitePatterns EF-hand calcium-binding domain. 482 494 IPR018247 -
Ahy4g0038 553 MobiDBLite consensus disorder prediction 21 54 - -
Ahy4g0038 553 ProSitePatterns EF-hand calcium-binding domain. 410 422 IPR018247 -
Ahy4g0038 553 ProSiteProfiles EF-hand calcium-binding domain profile. 469 504 IPR002048 GO:0005509
Ahy4g0038 553 Pfam EF-hand domain pair 402 462 IPR002048 GO:0005509
Ahy4g0038 553 Pfam EF-hand domain pair 471 534 IPR002048 GO:0005509
Ahy4g0038 553 MobiDBLite consensus disorder prediction 1 88 - -
Ahy4g0038 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Ahy4g0038 553 MobiDBLite consensus disorder prediction 55 77 - -
Ahy4g0038 553 ProSiteProfiles EF-hand calcium-binding domain profile. 508 539 IPR002048 GO:0005509
Ahy4g0038 553 SMART serkin_6 96 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0038 553 ProSitePatterns EF-hand calcium-binding domain. 446 458 IPR018247 -
Ahy4g0038 553 ProSitePatterns EF-hand calcium-binding domain. 517 529 IPR018247 -
Ahy4g0038 553 Pfam Protein kinase domain 96 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0038 553 ProSiteProfiles Protein kinase domain profile. 96 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0038 553 SUPERFAMILY EF-hand 394 535 IPR011992 -
Ahy4g0038 553 PANTHER SERINE/THREONINE-PROTEIN KINASE 39 542 - -
Ahy4g0038 553 Gene3D Transferase(Phosphotransferase) domain 1 182 361 - -
Ahy4g0038 553 Gene3D Phosphorylase Kinase; domain 1 98 181 - -
Ahy4g0038 553 CDD STKc_CAMK 96 353 - -
Ahy4g0038 553 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 39 542 - -
Ahy4g0038 553 Gene3D - 362 542 - -
Ahy4g0038 553 ProSiteProfiles EF-hand calcium-binding domain profile. 433 468 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0038 Ahy-Chr4 395924 400585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0038 1 547 EF-hand Containing Proteins AT5G12180 78.793 0.0 887
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Ahy4g0038 Pkinase 2.40E-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0038 K13412 - gmx:100781355 878.626