Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4374 ATGTCAGTGGCGATGAGAAATAAACCTCTTGAATTTGGGAGGCCTGTAACAAGTAAAAGAAAATTCAAGGACTTATTGCTTCAAAAGGATAATCAATTTTGTGCTGATTGTAATGCTCCACAACCTAAATGGGCGTCGGCTAATATTGGAGTATTTTTATGCTTTAAATGTTACAATGTGCACAGAAGTCTTGATACTCATATATCAAGGGTTTTGTCTGTGGGGGATGAATGGTCAGATGATGATATTGATGCAATGATTGAAGTTGGAGGAAATTCTTCTGCTAATTCAATATATGAAGCTTATATTCCAGAAGGATATGCAAAACCTCATCCAGATTCCAGTCAGGAAGAGCGCACAAAATTCATTCGGTCAAAATATGAATATCAAGAATTTTTGAAACCAAGTTTGCGCATTGTGTCTTCGAAATCTTCTCATCAATCAAGTTTCTCCAAACATAATGCTGATAGTTTCCGGAGCTCTTATGAATCCAGTTTCTCCAAACGTGATGCACATAGTTTTCGAAGTTCTCATGAACCCAGTTTCTCCATGCGTAGTGCGGATAGCTTTCGAAGCTGTCATGAATCCAGTTTCTCCCAATGTGATGCAGATAGTTTTCGAAGCACTACTAGTTTAAAGAATCTGGAAAGAACGAGAGAATTTATCGGAAAGTTGCAGGTGAAAGTGATTAAGGGCACAAATTTAGCTATTAGAGATATGATGACAAGCGATCCATATGTTGTCTTGAAACTTGGTAAACAGACTGTTAAGACAAATGTAATAAAGAGTAATTTGAACCCGGTCTGGAATCAGGTGCTTATACTATCTGTTCCTGAGGCTTTTGGCCCATTGGATTTGAAGGTGTTTGATCACGACTTGTTTTCGGCTGATGATATAATGGGAGAAGCACAGGTAGATCTTCAGCCCCTGATTGCATCAGCAATTGCATTTGGAGATGCTGGAATGTTTGATGATATGCAGATAGGAAAATGGCTAAAATCCCACGACAATGCACTAAAACATGATAGCACAGTTAATATAATTAATGGCAGGGTTAAACAAGAGATATCACTTAAGCTCCAGCACGTTGAATGTGGAGAATTAGACTTAGAACTCGAGTGGATACCTCTATAA 1134 0.3818 MSVAMRNKPLEFGRPVTSKRKFKDLLLQKDNQFCADCNAPQPKWASANIGVFLCFKCYNVHRSLDTHISRVLSVGDEWSDDDIDAMIEVGGNSSANSIYEAYIPEGYAKPHPDSSQEERTKFIRSKYEYQEFLKPSLRIVSSKSSHQSSFSKHNADSFRSSYESSFSKRDAHSFRSSHEPSFSMRSADSFRSCHESSFSQCDADSFRSTTSLKNLERTREFIGKLQVKVIKGTNLAIRDMMTSDPYVVLKLGKQTVKTNVIKSNLNPVWNQVLILSVPEAFGPLDLKVFDHDLFSADDIMGEAQVDLQPLIASAIAFGDAGMFDDMQIGKWLKSHDNALKHDSTVNIINGRVKQEISLKLQHVECGELDLELEWIPL* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4374 377 CDD C2_ArfGAP 222 366 - -
Ahy3g4374 377 CDD ArfGap 22 127 - -
Ahy3g4374 377 Pfam Putative GTPase activating protein for Arf 20 134 IPR001164 GO:0005096
Ahy3g4374 377 ProSiteProfiles C2 domain profile. 207 320 IPR000008 -
Ahy3g4374 377 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 12 165 IPR044518 GO:0005096|GO:0005543
Ahy3g4374 377 SMART C2_3c 224 319 IPR000008 -
Ahy3g4374 377 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 189 377 IPR044518 GO:0005096|GO:0005543
Ahy3g4374 377 Gene3D C2 domain 220 377 IPR035892 -
Ahy3g4374 377 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD10 189 377 - -
Ahy3g4374 377 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD10 12 165 - -
Ahy3g4374 377 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 223 368 IPR035892 -
Ahy3g4374 377 ProSiteProfiles ARF GTPase-activating proteins domain profile. 19 147 IPR001164 GO:0005096
Ahy3g4374 377 Gene3D Arf GTPase activating protein 13 139 IPR038508 -
Ahy3g4374 377 SMART arf_gap_3 20 140 IPR001164 GO:0005096
Ahy3g4374 377 Pfam C2 domain 223 311 IPR000008 -
Ahy3g4374 377 SUPERFAMILY ArfGap/RecO-like zinc finger 19 135 IPR037278 -
Ahy3g4374 377 PRINTS HIV Rev interacting protein signature 31 50 IPR001164 GO:0005096
Ahy3g4374 377 PRINTS HIV Rev interacting protein signature 50 67 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4374 Ahy-Chr3 143754356 143758682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4374 12 377 C2H2 Transcription Factor Family AT4G21160 57.453 1.37e-153 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4374 K12486 - fve:101308158 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4625 13 146665856 146670182 Ahy3g4374 3 143754356 143758682 hybridization