Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4352 ATGCCTCGTAAGGTAAACTACGGACTCGATTACGACGATGATTATGGCGATGAATATGACGACTATGATGATTATTATGAAGACTATGGAGAAGTACCTGAAACAAAGCAAGAGACACCGAGACCTCCTGGGGTTTGGCGATGCACCATTTGCACGTATGACAATGATGAGAGTATGACATCTTGTGATATTTGTGGTGTTATACGCCGTGACTTTGTAAACACTGGTACATCCAATATTAAACAAACAGTTGAAGACATAAGCAAAACATCTGGAGCATCCAAGTTGGCCAGGTCTCTTTTTGCTTCATTACCAAAACAGAATCCAAAAGAGGTTGTATTACTTCCCAAGCAGGATGATGGTTTTCAGACAGATGCCAGTAACTTCTGCAAGCATAGGAATGTTCAAGGAGAATTTCATGAATGTCATAAGGCGTTTAATACTAAAAGCCATTCCCATTTAAACATAGCTCCTTTCAAGTTTGATGTTCCATCCCCTGATGATGTAGTTTATACTGGTCTACGTTCTTCCAAAACAGCTTCAAAAGACAAAATTATGAATAATGACCATTCTGTTCAATCAAATGTTGAAAGTTTAGAGAATTTAACATCACTAATGCAAAAGGGTAGGCAGGATAGGTCAGCTGAGAGCAAACTTTCAAAGAAGCCAGCAGTTCATCTGGAAACTAGTGATAAAACTTCAAATGTGAATAAGAAAAATGGTACACTTGATATTCGCTCAAGCAAAGGAAAGGCTGGTAGTTCATCTGCAATGCCTGAAGTCAAAGGTATTGATGCAATTAATTTCTCTTCTATCAAAGAGGGAAAATCCGAAAGTCTTTCCAGCAGTTTCAACAAAATAGCTGTGGACGTAAGATCTGGGATTTCAGATAATACTAACTCTAAGGGATCTCATCCACAAGTTTCTTACAAACCTGAAAAATGGATGCTACCTCAACAAGCTGAAGATACGTTGACTCAGCTGAATCTTGCAATTGTTGGACATGTTGATTCTGGGAAATCAACACTCTCAGGTAGGTTACTTCACCTATTGGGACGGATTTCCCAAAAACAAATGCACAAATTTGAAAAGGAGGCCAAAATACAGGGCAAAGGATCCTTTGCTTATGCTTGGGCACTTGATGAAAGCTCTGAAGAAAGGGAAAGGGGAATAACTATGACAGTGGCTGTTGCTTATTTTGACACTAAGAAATATCATGTTGTGGTTCTTGACTCCCCCGGGCATAAAGATTTTGTGCCAAACATGATTTCTGGAGCAACACAGGCTGATGCTGCAATTCTTGTCATAGATGCTTCACGTGGTTCATTTGAAGCTGGTATGGATGGTGGCAAGGGACAAACTAGGGAGCATGCACAACTTATTAGAAGCTTTGGTGTTGACCAGGTTATAGTTGCAGTGAATAAGATGGATACAGTAGCGTATGCCAAAGATCGATTTGATTATATAAGACAGCAGTTGGGAATGTTTCTGCGCACTTGTGGTTTCAAAGATTCTTGTGTGTCATGGATTCCTATGAGTGCAATGGAAAATCAAAATTTGGTCGCATCCCCTTCTGACGCTAGTTTTAAAAGCTGGTATAACGGACCATATTTGTTAGATGCAATCGACTCACTTCCACCACCTGCTAGAGAATACTCGAAACCGCTGCTAATGCCAATATGTGATGTCATCAAATCACCCACACTTGGACAGGTGTCTGCTTGTGGTAAACTGGAAGCAGGAGCTCTTCGGAGTGGATCAAAGGTCTTAGTTATGCCTGCAGCCGTCATGGGAACAGTACGCTCAATGGAGCGTGACTCTAATGCCTGCAGTGTTGCAAGGGCCGGAGATAATGTATCTGTAACATTGCAAGGTGTTGATGGAAGTAATGTGATTGCAGGAGGTGTGTTATGCCATCCTGACTTTCCTGTTGCAGTTTCTAATCATTTGGAGTTGAAAGTGCTTGTTTTGGATGGTGCAAGCCCTGTATTGATGGGTTCTCAGTTGGAGTTTCATATACACCATGCAAAGGAGCCTGCAAGGGTTTCAAGAATATCATCAATACTTGATCCAAAGACTGGTAAGGTGACCAAAAAGTCACCTCGCTGTCTCACTGCAAAGCAAAGTGCAGTAATTGAGGTAACTTTGCAGGAGCCAGTTTGTGTAGTAGATGTCTCAATTTGTAAAGCTCTTGGCAGGGTATCGCTAAGATCTTCAGGTAGAACAATCGCTGTGGGACTTGTGACGAGAATAATTGAAGAGCTACACTAG 2271 0.4126 MPRKVNYGLDYDDDYGDEYDDYDDYYEDYGEVPETKQETPRPPGVWRCTICTYDNDESMTSCDICGVIRRDFVNTGTSNIKQTVEDISKTSGASKLARSLFASLPKQNPKEVVLLPKQDDGFQTDASNFCKHRNVQGEFHECHKAFNTKSHSHLNIAPFKFDVPSPDDVVYTGLRSSKTASKDKIMNNDHSVQSNVESLENLTSLMQKGRQDRSAESKLSKKPAVHLETSDKTSNVNKKNGTLDIRSSKGKAGSSSAMPEVKGIDAINFSSIKEGKSESLSSSFNKIAVDVRSGISDNTNSKGSHPQVSYKPEKWMLPQQAEDTLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKFEKEAKIQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASRGSFEAGMDGGKGQTREHAQLIRSFGVDQVIVAVNKMDTVAYAKDRFDYIRQQLGMFLRTCGFKDSCVSWIPMSAMENQNLVASPSDASFKSWYNGPYLLDAIDSLPPPAREYSKPLLMPICDVIKSPTLGQVSACGKLEAGALRSGSKVLVMPAAVMGTVRSMERDSNACSVARAGDNVSVTLQGVDGSNVIAGGVLCHPDFPVAVSNHLELKVLVLDGASPVLMGSQLEFHIHHAKEPARVSRISSILDPKTGKVTKKSPRCLTAKQSAVIEVTLQEPVCVVDVSICKALGRVSLRSSGRTIAVGLVTRIIEELH* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4352 756 Gene3D Translation factors 647 756 - -
Ahy3g4352 756 MobiDBLite consensus disorder prediction 1 25 - -
Ahy3g4352 756 SUPERFAMILY Ran binding protein zinc finger-like 43 69 IPR036443 -
Ahy3g4352 756 Pfam Elongation factor Tu C-terminal domain 650 751 IPR004160 -
Ahy3g4352 756 ProSitePatterns Zinc finger RanBP2-type signature. 46 65 IPR001876 -
Ahy3g4352 756 CDD EF1_alpha 329 548 - -
Ahy3g4352 756 Pfam Elongation factor Tu GTP binding domain 328 544 IPR000795 GO:0003924|GO:0005525
Ahy3g4352 756 MobiDBLite consensus disorder prediction 211 228 - -
Ahy3g4352 756 CDD HBS1_C_III 643 751 - -
Ahy3g4352 756 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 325 550 IPR000795 GO:0003924|GO:0005525
Ahy3g4352 756 ProSiteProfiles Zinc finger RanBP2 type profile. 42 71 IPR001876 -
Ahy3g4352 756 MobiDBLite consensus disorder prediction 229 254 - -
Ahy3g4352 756 PANTHER TRANSLATION FACTOR 49 754 - -
Ahy3g4352 756 MobiDBLite consensus disorder prediction 207 258 - -
Ahy3g4352 756 PANTHER OS04G0595300 PROTEIN 49 754 - -
Ahy3g4352 756 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 327 570 IPR027417 -
Ahy3g4352 756 PRINTS GTP-binding elongation factor signature 408 418 IPR000795 GO:0003924|GO:0005525
Ahy3g4352 756 PRINTS GTP-binding elongation factor signature 424 435 IPR000795 GO:0003924|GO:0005525
Ahy3g4352 756 PRINTS GTP-binding elongation factor signature 329 342 IPR000795 GO:0003924|GO:0005525
Ahy3g4352 756 PRINTS GTP-binding elongation factor signature 469 478 IPR000795 GO:0003924|GO:0005525
Ahy3g4352 756 PRINTS GTP-binding elongation factor signature 388 396 IPR000795 GO:0003924|GO:0005525
Ahy3g4352 756 Gene3D - 316 547 IPR027417 -
Ahy3g4352 756 Gene3D Translation factors 553 642 - -
Ahy3g4352 756 SMART zf_4 44 68 IPR001876 -
Ahy3g4352 756 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 648 752 IPR009001 -
Ahy3g4352 756 SUPERFAMILY Translation proteins 547 642 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4352 Ahy-Chr3 143494649 143500473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4352 155 754 Eukaryotic Initiation Factors Gene Family AT5G10630 62.292 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4352 K14416 - gmx:100801724 1147.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4603 13 146406149 146411973 Ahy3g4352 3 143494649 143500473 hybridization
Ahy20g0189 20 1677142 1679818 Ahy3g4352 3 143494649 143500473 PCT
Ahy10g0022 10 308376 310509 Ahy3g4352 3 143494649 143500473 PCT