Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4349 ATGGCCAAGCATATGCGGGGGAACAATTATAACTGCATTCCTATAACACCCAGATCGAGATTAGAGAGGCTTCTGAGGGAGAGAGAGCTAAGAAAGTCAAACAAGTATTTTGAGGAGACAAGAGATGGCAACAAAGAAGCGGAACAAGTTTATAGTGACTCGTTAACAGAGAGCGACAGTTTTAATTCTCTCAATGAGGAAGACATTTCTGAAGCACTTGCTGTTGCAAAAGTATTTCCAGATAGAAGTCAAAGGCCGGAGGAGCGGCCACGCAAACAACGGTTGTTGGTGGTAGCTAATAGGTTGCCTGTCTCAGCTGTTAGGGAGGGTGAGGACTCATTCCACCTTGAGATCAGTGTTGGCGGCCTAGTCAGTGCACTTTTAGGTGTAAAGGAGTTTGAAACTAGATGGATTGGGTGGGCTGGTGTGAATGTATCTGATGGTGTTGGGCAGAAAGCATTGACTAAAGCTTTAGCTGAAATGAGATGCATTCCAGTTTTTCTTGATGAGCAGATTGTGAATCAATACTATAACGGTTACTGCAACAACATCTTATGGCCTCTTTTTCATTATCTTGGGCTTCCACAAGAAGACAGACTTGCTACCACTCGCAGCTTCCAATCTCAATTTGATGCATATAAGAAGGCAAACCAGATGTTTGCTGATGTAGTAAATAGGTACTATAAGGAAGGAGATGTTGTTTGGTGCCATGATTACCATCTAATGTTCCTTCCAAAATGTTTAAAAGAATACAATGACAAAATGAAAGTTGGCTGGTTTCTTCATACTCCCTTTCCTTCCTCGGAAATTCATAGGACTCTGCCATCAAGAACAGAGCTATTGAGATCTGTACTTGCTGCTGACTTGGTGGGATTCCATACTTATGATTATGCCAGACATTTTGTAAGTGCTTGTACTCGCATTCTTGGGCTTGAAGGGACACCTGAAGGAGTAGAAGATCAAGGGAAGCTAACTCGTGTGGCTGCGTTTCCTATTGGGATTGATTCTGATCGGTTTATTCGAGCCCTTGAACTCCCTGAAGTCCAGGAGCACATGAAAGAACTGAAAGAAAGATTTGCAGGCAGAAAGGTAATGTTGGGCGTTGATCGTCTTGATATGATAAAAGGAATTCCGCAGAAGATATTGGCATTTGAAAAGTTCCTTGAGGAGAACCCACGCTGGCGTGATAAAGTTGTCTTGTTGCAAATTGCTGTACCAACTAGGACAAATGTTCCTGATTATCAAAAGCTTACAAGTCAGGTGCATGAGATTGTTGGCCGCATCAATGGAAGATTTGGAACCCTTACGGCTGTTCCAATACACCATCTGGATCGATCACTTGACTTCTATGCATTATGTGCACTTTATGCTGTTACTGATGTAGCACTTGTTACATCTCTAAGGGATGGAATGAATCTTGTCAGCTATGAATTCGTTGCATGTCAAGCTTCCAAGAAAGGGGTTCTCATTTTAAGTGAGTTTGCAGGTGCTGCACAGTCTCTTGGTGCTGGTGCTATCTTGGTAAATCCATGGAATGTCACAGAGGTTGCTGCTTCTATTGGTTATGCACTGGATATGCCAGCCGATGAAAGAGAAAAACGGCATCTAGTTAACTTCAAGCACGTGACAACTCACACTTCACAAGAATGGGCAGCAACTTTTGTGAGTGAACTGAATGATACGATTGTCGAAGCGCAGCTTAGGACAAGACAAGTTCCACCATTACTTCCCAAGGAAGTGGCAGTTGATTGTTACTCAAAATCTAATAACCGATTAATTATACTGGGTTTCAATGCCACTTTGACAGAACCAGTGGATGCCCTTGGAAGGGGTGGTCAAATTAGAGAAATGGAACTTAAATTGCACCCAAATATAAAGAAGCCTTTAAAGAAGTTGTCTGATGATCCAAAGACAACAATTGTTGTTCTGAGTGGGAGTGATCGAACTGTCCTGGACAAAAATTTCAGGGAATACAATATGTGGTTAGCAGCAGAAAATGGGATGTTTCTACGGCATACTTCAGGTGAATGGATGACAACCATGCCTGAAAATTTACATATGGATTGGGTTGATAGCGTAAAGCATGTTTTTGAGTATTTTACCGAAAGAACTCCGCGGTCTCATTTTGAGCTTCGTGAGACTTCAGTTGTATGGAATTACAAGTATGCAGATATTGAGTTTGGAAGGCTTCAAGCAAGAGATCTGCTTCAGCATCTTTGGACAGGACCGATATCCAATGCATCTCTTGACGTTGTCCAAGGTGGTCGATCTGTTGAGGTCAGGGCAATTGGTGTCTCAAAGGGAGCAGCTATTGATCGCATCTTAGGAGAGATCGTTCATGACAAAGGAATGAAGGCTCCAATTGATTATGTCTTATGCATCGGGCACTTTCTAGCAAAGGATGAAGATGTCTATAAATTTTTTGAACCTGAGCTTCCTTGTGAATCATCACCATTAGCACGAGCTATGCCTTCCAATTCTTTAAGGTCATCACCTCTGCTAAAATTTCCAGTCAGCAAAAATGGGTCCAAAGCAGCTCGCTATAAGAAGCAACGTTCAATGTCAACCATAGAAAAGTTAGAAATCGATCATGCAAGGGGCGATCCATGGATACCAACTTATCATGATAGAACATCACTACATGAGGGCTCTTCAGTGCTCGATCTTCAAGGCGATAATTACTTCTCTTGTGCTGTTGCACGCAAGAGATCAAGTGCACGCTACTTACTCAAAACCTCAGATGATGTTGTCAATCTCTTAAGTAACATGGCAGATCATTCATCAACACGATCAACTTAA 2799 0.4219 MAKHMRGNNYNCIPITPRSRLERLLRERELRKSNKYFEETRDGNKEAEQVYSDSLTESDSFNSLNEEDISEALAVAKVFPDRSQRPEERPRKQRLLVVANRLPVSAVREGEDSFHLEISVGGLVSALLGVKEFETRWIGWAGVNVSDGVGQKALTKALAEMRCIPVFLDEQIVNQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFDAYKKANQMFADVVNRYYKEGDVVWCHDYHLMFLPKCLKEYNDKMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSDRFIRALELPEVQEHMKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPRWRDKVVLLQIAVPTRTNVPDYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFYALCALYAVTDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNVTEVAASIGYALDMPADEREKRHLVNFKHVTTHTSQEWAATFVSELNDTIVEAQLRTRQVPPLLPKEVAVDCYSKSNNRLIILGFNATLTEPVDALGRGGQIREMELKLHPNIKKPLKKLSDDPKTTIVVLSGSDRTVLDKNFREYNMWLAAENGMFLRHTSGEWMTTMPENLHMDWVDSVKHVFEYFTERTPRSHFELRETSVVWNYKYADIEFGRLQARDLLQHLWTGPISNASLDVVQGGRSVEVRAIGVSKGAAIDRILGEIVHDKGMKAPIDYVLCIGHFLAKDEDVYKFFEPELPCESSPLARAMPSNSLRSSPLLKFPVSKNGSKAARYKKQRSMSTIEKLEIDHARGDPWIPTYHDRTSLHEGSSVLDLQGDNYFSCAVARKRSSARYLLKTSDDVVNLLSNMADHSSTRST* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4349 932 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 94 559 IPR012766 GO:0003825|GO:0005992
Ahy3g4349 932 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 93 562 - -
Ahy3g4349 932 SUPERFAMILY HAD-like 591 779 IPR036412 -
Ahy3g4349 932 Gene3D - 617 777 IPR023214 -
Ahy3g4349 932 CDD HAD_TPP 592 811 - -
Ahy3g4349 932 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 53 922 - -
Ahy3g4349 932 Pfam Glycosyltransferase family 20 94 559 IPR001830 GO:0003824|GO:0005992
Ahy3g4349 932 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 53 922 IPR001830 GO:0003824|GO:0005992
Ahy3g4349 932 Gene3D Glycogen Phosphorylase B; 86 340 - -
Ahy3g4349 932 Gene3D - 683 763 - -
Ahy3g4349 932 MobiDBLite consensus disorder prediction 37 57 - -
Ahy3g4349 932 CDD GT20_TPS 94 559 IPR001830 GO:0003824|GO:0005992
Ahy3g4349 932 Gene3D Glycogen Phosphorylase B; 341 543 - -
Ahy3g4349 932 Pfam Trehalose-phosphatase 616 812 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4349 Ahy-Chr3 143480777 143489609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4349 5 929 Trehalose Biosynthesis Gene Families AT1G78580 75.000 0.0 1403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4349 K16055 - gmx:100816642 1566.98