Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4337 ATGAGGATTAACTCGGAGCGAAAGCCAGGGCAGAATGCAAAGCAGAATTCTGTTCCATCTTATGGTTCAGCACCAAAGGATGCATGTGGGAATAGAGGTAGGTTTTATGGAGGGGAAGATGATGCCTTCTGGAGACTCTCATTTGGTGAAGAGAGTCATGAGCATAACAAGAGTAGTGAAGATATCTTGAAATCAACACTGCACAATTTGGATGGTGATCATGCCAATGATGTCATTCAGTCCTCAGCACAATTTGGACTGAGTGATAAAAGACATGGAAGAAGAGAAGCTAGTCTGAGGTTCAAGCAGAAGGATATTGGAATGGGAGAGGAAAGAAAGTTGCCAAGTGAGAATGAGTGTGATCATGGAGGAAAGGAATTTGAATTCTTAAGGAGGAGATATGAAAGGAAAGCACAAAAGGTTTTTCAAGATCAACTCTTGAAACTAGAAAAAGCTGCAGATAATCTAGAATCTGAATTTGCATCTAGCAACTCTAAGTCCTTGGAAAATGATGTGCTGAAATCCGAATCGCCTAGAACGATTCGAACACCAAGAACAAATTCGTACATCTCCTCTGTAAATTCAAAGAATTCTGGCCATGGAAATATTAAAGAAGGTGGTGTTAACTCTGGGAAGAATACTGAAGAGTTGAGAGTGAAGGTTAACAAGAAAAGGCAATCAATACATGTAAGCAAAGAACTTCAGAGGAGGAAGCCAAGGAATAGTCCAAGGGTAAGAGTGCATTCTCCGAGGATGGCTTCCAAGGTCGAAATCTGCAAAATAAAGGCCATAGAAGACATGAAGAAAGCAAAACTAAAGATGAAGAAAGAGGAGGAAATTTCAGAGGAAACGGCAGGTGTAGACAGCTTTGCTGTGGTGAAATGCTCAATGGATCCGCAACAAGACTTCAGAGATTCGATGATGGAGATGATCGTGCAGAGGAAGATCAGCAGGCCAGAAGAAATGGAGGAGCTGTTGGCATGTTATCTCACACTGAATTCTAGTGAGTATCATGATATCATCATCAAGGTTTTTAGGGAGGTGTGGTTATATGTGAACAAGGTTTGTTGTCTTAAATCAGAAGCAATGCAGTTGCAATGA 1101 0.4105 MRINSERKPGQNAKQNSVPSYGSAPKDACGNRGRFYGGEDDAFWRLSFGEESHEHNKSSEDILKSTLHNLDGDHANDVIQSSAQFGLSDKRHGRREASLRFKQKDIGMGEERKLPSENECDHGGKEFEFLRRRYERKAQKVFQDQLLKLEKAADNLESEFASSNSKSLENDVLKSESPRTIRTPRTNSYISSVNSKNSGHGNIKEGGVNSGKNTEELRVKVNKKRQSIHVSKELQRRKPRNSPRVRVHSPRMASKVEICKIKAIEDMKKAKLKMKKEEEISEETAGVDSFAVVKCSMDPQQDFRDSMMEMIVQRKISRPEEMEELLACYLTLNSSEYHDIIIKVFREVWLYVNKVCCLKSEAMQLQ* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4337 366 Coils Coil 139 166 - -
Ahy3g4337 366 MobiDBLite consensus disorder prediction 179 209 - -
Ahy3g4337 366 MobiDBLite consensus disorder prediction 216 240 - -
Ahy3g4337 366 PANTHER TRANSCRIPTION REPRESSOR OFP4 76 354 - -
Ahy3g4337 366 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 76 354 IPR038933 GO:0045892
Ahy3g4337 366 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 290 351 IPR006458 -
Ahy3g4337 366 ProSiteProfiles OVATE domain profile. 292 351 IPR006458 -
Ahy3g4337 366 Pfam Transcriptional repressor, ovate 296 350 IPR006458 -
Ahy3g4337 366 MobiDBLite consensus disorder prediction 160 249 - -
Ahy3g4337 366 MobiDBLite consensus disorder prediction 1 22 - -
Ahy3g4337 366 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4337 Ahy-Chr3 143370851 143371951 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Ahy3g4337 Ovate 1.50E-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4337 - - ahf:112792751 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4590 13 146249078 146250298 Ahy3g4337 3 143370851 143371951 hybridization
Ahy3g4337 3 143370851 143371951 Ahy20g0290 20 3022628 3024165 PCT
Ahy3g4337 3 143370851 143371951 Ahy10g0100 10 1029478 1031141 PCT
Ahy20g0290 20 3022628 3024165 Ahy3g4337 3 143370851 143371951 PCT
Ahy10g0100 10 1029478 1031141 Ahy3g4337 3 143370851 143371951 PCT