Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4318 ATGAAGACTTCTGAGGAATGGAAACCTTTTATGGTAATGATAGCAATTGATTTTTCTTCCACCATAGTGAACATTCTTCTAAAGAAAGTTCTTGAGGAAGGGATGGACCATTTGGTGTTTATCACATACCGTTTGTCAATTTCAACCATTTTCCTAGTCCCTATCAGCTACTTTTGGGAAAGAAACGGAAGACCAAGGCTCACATTTAGAATTTTGTGTTACCTTTTCTTCAGTGCCATTGTTGGGGCATCAGTCACACAGTACTTCTTCCTTCTTGGGATCCAATACACCTCTGCTACCTTTGCTTGTGCCTTTGTCAATATGGTACCTGTGATCACATTCATTATGGCATTGCCATTTGGATTAGAGACTCTGAACATCAAATGTAACAGTGGGAAAGCCAAGATTCTTGGTACACTGGTGTGTGTAGGAGGGGCATTGTTGTTGACACTTTATAAAGGAAAGCCCTTGTTTGATGTTTCTCACTATGAGTCTGCAGCAGCATCAACAGGCATGAGATCTGCAATGAAGCAACGTTCTTCTCCACCTACTAGAATCATTGAGAAATGGACCATTGGTGTAATAGCTTTGATTCTGGGAACACTGTTTTGGTCTTCATGGTTTATCTTGCAATCAACTATAGGGAAGCTTTATCCATGCCGGTATTCTAGCACAGCCATCATGACTTTGTTTGGAGCCATTCAATCAGCCATCCTTGCTTTGTCCACTGGCAGAGACTTGTCCATGTGGATCCCCAATGGCAGGATACAAATACTCACTGTTCTCTATTCTGGCATGGTTGGGTCAGGGTTGTGCTATGTGGGGATGTCATGGTGTGTTAAAAAGAGGGGTCCTGTGTTTACTGCAGCATTTAGCCCTCTTGTTCAGATAATGTCAGCCATGATTGATATCCCAGTCTTGCATGAGCAGCTCCATCTTGGAAGTGTGTTGGGATCCATGCTGGTAATGGTGGGATTGTATATTCTTCTGTGGGGTAAGAGCAAGGATAATCAGAATGGTGTGACAAATTTAGTAGAAGAAGGTGGAAACAAGGAACAAGTCCCTCCCCCACAAACAACACAACATGTTGCTATAACCTGCGATACACGCTCCAACTGA 1119 0.4272 MKTSEEWKPFMVMIAIDFSSTIVNILLKKVLEEGMDHLVFITYRLSISTIFLVPISYFWERNGRPRLTFRILCYLFFSAIVGASVTQYFFLLGIQYTSATFACAFVNMVPVITFIMALPFGLETLNIKCNSGKAKILGTLVCVGGALLLTLYKGKPLFDVSHYESAAASTGMRSAMKQRSSPPTRIIEKWTIGVIALILGTLFWSSWFILQSTIGKLYPCRYSSTAIMTLFGAIQSAILALSTGRDLSMWIPNGRIQILTVLYSGMVGSGLCYVGMSWCVKKRGPVFTAAFSPLVQIMSAMIDIPVLHEQLHLGSVLGSMLVMVGLYILLWGKSKDNQNGVTNLVEEGGNKEQVPPPQTTQHVAITCDTRSN* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4318 372 Pfam EamA-like transporter family 12 150 IPR000620 GO:0016020|GO:0016021
Ahy3g4318 372 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020|GO:0016021
Ahy3g4318 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Ahy3g4318 372 PANTHER WAT1-RELATED PROTEIN 9 352 - -
Ahy3g4318 372 PANTHER WAT1-RELATED PROTEIN 9 352 IPR030184 GO:0016021|GO:0022857
Ahy3g4318 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4318 Ahy-Chr3 143212046 143214580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4318 4 264 Nodulin-like Gene Family AT3G30340 47.893 4.24e-88 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4318 - - gmx:100791663 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4569 13 146057193 146059829 Ahy3g4318 3 143212046 143214580 hybridization
Ahy3g4318 3 143212046 143214580 Ahy20g0308 20 3207528 3211839 PCT
Ahy3g4318 3 143212046 143214580 Ahy10g0119 10 1231797 1235866 PCT
Ahy20g0308 20 3207528 3211839 Ahy3g4318 3 143212046 143214580 PCT
Ahy10g0119 10 1231797 1235866 Ahy3g4318 3 143212046 143214580 PCT