Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4311 ATGTTCTCTCCTCTCCCACCTGCCACGGTAACAACAACACTAGAACTCATGAAGCCCCTCTACAGATTCTTAATAGTAGCCATGGCGCTGTTTTCTGTGGTGGAATCTTCCAAATCTATATCTTCATGCAACACTGGCAGAAGTAGCGTAGAGCAGAGGCTGGTAGCAAAGGCTTTCAAGTCTGTATCTGGCTTCAACTCTTCGTCCTCCTGGTTCCGAAAAGGAGTATTACTTTCCAACTGTTCATCCCAATCTCATGTCATCAGCATAAACCTTCCATCCAAGAATCTCAGCGGAACCATCTCCTGGGGTTATCTCATCAACATCTCAAACCTCCAGCTTCTTGATCTCTCAGGGAATTCCTTACAAGGCCGTGTCCCAACTTGGTTATGGTCAACCTCATCCTTACGTCACCTAAACCTCTCCAACAACAGGTTTGGAGGTAGCGTCGTCTTCAGTACCACCGCCTTCATTCAAATGCTCAACCTCTCCCACAACAGGTTCACCAATTGGGTGGTCCAACACCACCAATATCAACGCTACTCTTCCTTCTTCCCAAACCTTAAAATCCTTGACCTCTCTCACAACCACTTAAGGACACCCCTCCCTTCAGGCTTCACCAACCTCACCAACCTTCAATACCTTGACTTATCAAACAACAACCTCACCGGAACTTTCCCTTCCGATTTTCCTCCACTCAACAACCTCCACTTCCTAAACATCTCCTTCAACCGCTTCAACTCAACCGTTAGCCTCAACAAGTTCAACAAATTCGGCAAAGCCGCCTTTATCCACGCTGGCAAGAATTTCACCTACACCGCCATTACTCCAATTCACAGCAACAACCATTCCGCAACTACCACCCCAGCCTCACAAGCCATTCACACAAGATACAAACACAAACACAAACACAAGACACACATTATTATCGCGGTTTCGTGTGCTTCTTCGTTAGCGGTTATTTTTATCATTTGGGCGCTACTACGCGTTGCTAGGAAGAAGAAGAAAGAGCGTTGCAAGATTAAGAAATGGGCAATATCGAAAGCGGAGGACATGATGAGCGGCGTGACGGTGGAGAAATCAGGGCCGTTCGAGTTCGAGACTGAGTCAGGGTCCACGTGGGTGGCTGATCTGAAGGAACCATGTTCTGCGGCCGTGGTGATGTTCGAGAAGCCGTTGATGAGCCTGACCTTCAGGGACCTCATCGCTGCCACGTCACACTTCGGGAAGGAGTCACTCCTAGCGGAAGGCAGGTGTGGACCCCTCTACAGGGCTGTACTCCCCGGCGATCTCCACGTGGCAATCAAGGTACTGGAATACGCCAGGGACGTTGATCCTCGTGACTCCATTGCAATGTTCGTTGACCTCTCAAAGCTCAAGCACCCAAATTTGTTGCCCCTCTCTGGTTACTGCATTGCAGGTAAGGAGAAGCTGGTACTGTACGAGTTTATGGCAAACGGCGATTTGGGGAGGTGGCTACACGAGCTTCCAACGGGGGACACCAACGTGGAGGACTGGACACGCGACACGTGGGAGATTCAAAACGGCGTCGTTGAGGGGTCATCAGAGAAAATGGGGTGGCTAACACGTCACCGTATTGCGGTTGGGATAGCGCGTGGACTAGCTTACCTTCACCACGCGGGTTCCAAACCCGTCGTGCACGGCCACCTCGTTACCTCCAACATTCTACTCGCCGACGACTTCGAGCCACGAATATCGGATTTCGGGCTGCGGGGAGAACCGAATCCGAATTGCGGGACGGAGGGTGACGTGTACTGCTTCGGGATGGTGCTGATGGAGATGTTGACAGGGAAGACAGGGTCGGAGGAAACGGTGAGCGCGGTGAGGAAGGCGGTGAGGGAAGGGGAGGGGGTTAGGGTTCTGGAGGAGAGGCTGCGAGTGGGCGGTGAGTGGGAGAGTGAGATGGTGGAGAGCCTCCGAGTGGCGTACCTTTGCACAGCTGAGTCGCCTTCCAAGAGGCCCACTATGAGGCAGGTTTTGGGCTTGCTCAAAGACATTAGTCCAAACCAACCACTCACCCCGAGTTGA 2049 0.5178 MFSPLPPATVTTTLELMKPLYRFLIVAMALFSVVESSKSISSCNTGRSSVEQRLVAKAFKSVSGFNSSSSWFRKGVLLSNCSSQSHVISINLPSKNLSGTISWGYLINISNLQLLDLSGNSLQGRVPTWLWSTSSLRHLNLSNNRFGGSVVFSTTAFIQMLNLSHNRFTNWVVQHHQYQRYSSFFPNLKILDLSHNHLRTPLPSGFTNLTNLQYLDLSNNNLTGTFPSDFPPLNNLHFLNISFNRFNSTVSLNKFNKFGKAAFIHAGKNFTYTAITPIHSNNHSATTTPASQAIHTRYKHKHKHKTHIIIAVSCASSLAVIFIIWALLRVARKKKKERCKIKKWAISKAEDMMSGVTVEKSGPFEFETESGSTWVADLKEPCSAAVVMFEKPLMSLTFRDLIAATSHFGKESLLAEGRCGPLYRAVLPGDLHVAIKVLEYARDVDPRDSIAMFVDLSKLKHPNLLPLSGYCIAGKEKLVLYEFMANGDLGRWLHELPTGDTNVEDWTRDTWEIQNGVVEGSSEKMGWLTRHRIAVGIARGLAYLHHAGSKPVVHGHLVTSNILLADDFEPRISDFGLRGEPNPNCGTEGDVYCFGMVLMEMLTGKTGSEETVSAVRKAVREGEGVRVLEERLRVGGEWESEMVESLRVAYLCTAESPSKRPTMRQVLGLLKDISPNQPLTPS* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4311 682 Gene3D Ribonuclease Inhibitor 50 154 IPR032675 -
Ahy3g4311 682 Gene3D Transferase(Phosphotransferase) domain 1 484 580 - -
Ahy3g4311 682 PRINTS Leucine-rich repeat signature 112 125 - -
Ahy3g4311 682 PRINTS Leucine-rich repeat signature 209 222 - -
Ahy3g4311 682 ProSiteProfiles Leucine-rich repeat profile. 211 232 IPR001611 GO:0005515
Ahy3g4311 682 SUPERFAMILY RNI-like 74 248 - -
Ahy3g4311 682 Pfam Leucine rich repeat 96 146 IPR001611 GO:0005515
Ahy3g4311 682 Pfam Leucine rich repeat 186 246 IPR001611 GO:0005515
Ahy3g4311 682 SUPERFAMILY Protein kinase-like (PK-like) 398 675 IPR011009 -
Ahy3g4311 682 Gene3D Ribonuclease Inhibitor 155 312 IPR032675 -
Ahy3g4311 682 PANTHER KINASE, PUTATIVE-RELATED 214 678 - -
Ahy3g4311 682 PANTHER KINASE, PUTATIVE-RELATED 19 224 - -
Ahy3g4311 682 ProSiteProfiles Protein kinase domain profile. 408 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g4311 682 Gene3D Transferase(Phosphotransferase) domain 1 581 679 - -
Ahy3g4311 682 Gene3D Phosphorylase Kinase; domain 1 368 483 - -
Ahy3g4311 682 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 214 678 - -
Ahy3g4311 682 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 19 224 - -
Ahy3g4311 682 Pfam Protein tyrosine and serine/threonine kinase 412 578 IPR001245 GO:0004672|GO:0006468
Ahy3g4311 682 SMART LRR_typ_2 109 133 IPR003591 -
Ahy3g4311 682 SMART LRR_typ_2 209 232 IPR003591 -
Ahy3g4311 682 SMART LRR_typ_2 185 208 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4311 Ahy-Chr3 143140856 143143642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4311 87 673 Receptor kinase-like Gene Family AT5G07280 30.577 1.19e-72 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Ahy3g4311 PK_Tyr_Ser-Thr 2.60E-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4311 - - gmx:100788556 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4561 13 145998269 146001203 Ahy3g4311 3 143140856 143143642 hybridization
Ahy3g4311 3 143140856 143143642 Ahy20g0332 20 3471943 3474805 PCT
Ahy3g4311 3 143140856 143143642 Ahy10g0144 10 1396375 1399526 PCT
Ahy20g0332 20 3471943 3474805 Ahy3g4311 3 143140856 143143642 PCT
Ahy10g0144 10 1396375 1399526 Ahy3g4311 3 143140856 143143642 PCT