Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4308 ATGAATAACCCCACCGTCATTGAGAGGTTCTCTGAGTTCTATGATAATTGGATTTGTAAACTCCAAGAGATCCTCAAGCAGCTTCTTCATGTTTCTAACCAACACCACCTTTTGGCCGAACATGATCTTCAATCTCTGGTCTCCAAAGTCACAACACACTTAAAAGAATACTACACCGTCAAATGGAGTCTAGCGCGCGAGGACATTGTTATCTTTTTCTCGCCGCCTTGGCTAACACCTCTTGAAAAGGCATACCTTTGGATCACGGGATGGAAGCCTTCCACCGCCTTCAAAGTGCTGGAGTCTCTCAAGAAGAGTAACTTATTTGAGATGACAGAGGAACAGGAAAGGAAGATTGAGGGACTCAGGATGAGGATGAGGATGGAGGAGGAGAAGGTTGAGAGGGAGATGGAGAGGCAACAGGTTGCCATGGCGGATAGCAAGATCGTGAAGCTGGCTAAACGGTCTGGAAGAGCCACGTGGAAGAAGAATAATAATGAAGAAGATTATGATGAGCTGGTGCAGTTGGCGATGAAGGATGTGTTTGGGGGATTGGAGAGAATAATGAAGGCTTCTGATTGTGCGAGGTTGAAGACGTTAAAAGGGATTTTGGATGTTCTTCAACCAATGCAGTGTGTCCACTTCTTGACTGCTAATATCACTATACAACTTCGTCTCAAGCAATGGGGTAACAACTGCCAACTGATTCATGATTCTCATGCTGGATCCATGCAGGAATCCAATCATAAAATCTAA 756 0.4471 MNNPTVIERFSEFYDNWICKLQEILKQLLHVSNQHHLLAEHDLQSLVSKVTTHLKEYYTVKWSLAREDIVIFFSPPWLTPLEKAYLWITGWKPSTAFKVLESLKKSNLFEMTEEQERKIEGLRMRMRMEEEKVEREMERQQVAMADSKIVKLAKRSGRATWKKNNNEEDYDELVQLAMKDVFGGLERIMKASDCARLKTLKGILDVLQPMQCVHFLTANITIQLRLKQWGNNCQLIHDSHAGSMQESNHKI* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4308 251 Pfam Seed dormancy control 25 101 IPR025422 GO:0006351|GO:0043565
Ahy3g4308 251 Coils Coil 112 139 - -
Ahy3g4308 251 PANTHER - 5 234 - -
Ahy3g4308 251 ProSiteProfiles DOG1 domain profile. 7 236 IPR025422 GO:0006351|GO:0043565
Ahy3g4308 251 PANTHER PROTEIN DOG1-LIKE 4 5 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4308 Ahy-Chr3 143113040 143114115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4308 10 218 bZIP Transcription Factor Family AT3G12250 26.316 1.76e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4308 - - gmx:100808459 276.559