Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4306 ATGTCAGAGGGATTTGAGATTCATCAAGAGAATAATGAAGGAAGTGGTGGCGGCAAGAGTAGTAATGATAATGAGGGTGAGGAAAATTCATTTGACTTGAATGAAGGAGCGGCTATGATGAGTAGTGATGAGGAATTGGAAGAAGAGAATAATAATGAAGAAGAAGGGAATTCAACAAATCCAAGTAGCAGCAGCACAGCATCAAGAGAAGGGAAGAGAGGGAGTGGTGTGAGACAATATGTGAGATCAAAGATGCCAAGGCTTCGTTGGACTCCTGATCTTCATCTCTCCTTTGTCCATGCTGTTCAGAGGCTTGGAGGTCAAGAAAGAGCAACACCTAAATTGGTGCTTCAGCTAATGAATGTCAGAGGCCTAAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTATCGAAGCAAGAAACTTGATGACTCTGGCCAAGTAGTAAGAAGTGAAAGACAGAGAAGCAAGCATGAAGTAGGTGGTGTGGCGTATGAGACGATGATGAAGAGGAGTAGTCCTCATCAACATTTCAAGATGGGAAACGGTGGAATTTTTCTTACTACTAACTACACCACCACCACTACTCCATTCTCCTCCCTCCCACATTCTTCAAAGCCCACAAACCACCTCCTATGGCACTTGAATCATCAAATACCTTCTATTAGAAGACCAATAACACCACCCTTGCAAACTCAACTAGCCAGCAGAATTACTCCCATGAGACCAAGCCGATTTCTTGAAGAGAAAAAGTGGCCTCCTTTTCATCACTGGAAATTCAAAAGGCTTTCTAATACCAACAACATTACACTACCCTCATCACATTCCTCTCCATTTCCCACCACCTCTGACTTCATCACCTTTGGAGAAAACACCACCACAACAATCAGAGACTATCTATCAAACTCCAATACTTTCAAGTTGAATAATCAAGACAAGCAGTTGCAGCACAAAGAGAAGCAATGGGTTCCAGATTTGCAACTGGGTTTGAGTCATCACAAAGATGGAGACAACAATGATGGCACAGGAACCCCAGAAATTAGCACTAAACTTTCACTTTCATAG 1065 0.4263 MSEGFEIHQENNEGSGGGKSSNDNEGEENSFDLNEGAAMMSSDEELEEENNNEEEGNSTNPSSSSTASREGKRGSGVRQYVRSKMPRLRWTPDLHLSFVHAVQRLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDDSGQVVRSERQRSKHEVGGVAYETMMKRSSPHQHFKMGNGGIFLTTNYTTTTTPFSSLPHSSKPTNHLLWHLNHQIPSIRRPITPPLQTQLASRITPMRPSRFLEEKKWPPFHHWKFKRLSNTNNITLPSSHSSPFPTTSDFITFGENTTTTIRDYLSNSNTFKLNNQDKQLQHKEKQWVPDLQLGLSHHKDGDNNDGTGTPEISTKLSLS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4306 354 MobiDBLite consensus disorder prediction 1 24 - -
Ahy3g4306 354 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 86 141 IPR006447 GO:0003677
Ahy3g4306 354 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 354 - -
Ahy3g4306 354 MobiDBLite consensus disorder prediction 1 84 - -
Ahy3g4306 354 Pfam Myb-like DNA-binding domain 88 138 IPR001005 -
Ahy3g4306 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 142 IPR017930 -
Ahy3g4306 354 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 354 IPR044848 GO:0003700
Ahy3g4306 354 SUPERFAMILY Homeodomain-like 84 140 IPR009057 -
Ahy3g4306 354 MobiDBLite consensus disorder prediction 329 354 - -
Ahy3g4306 354 Gene3D - 85 142 - -
Ahy3g4306 354 MobiDBLite consensus disorder prediction 55 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4306 Ahy-Chr3 143088489 143092663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4306 77 147 G2-like Transcription Factor Family AT2G42660 81.690 2.82e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy3g4306 Myb_DNA-binding 7.50E-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4306 - - adu:107482239 644.039