Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4298 ATGGCGTCGCCCACCAAGGAACGTGAAAACTTCGTCTACACCGCCAAACTTGCTGAACAAGCCGAGCGCTATGAAGAAATGGTGGATGCAATGAAGAATGTAGCGAAGCTAAACGTGGAGTTGACGGTTGAGGAGCGAAACCTTCTGTCAGTCGGGTACAAGAATGTAGTTGGGGCTCGCAGGGCTTCATGGAGGATTCTCTCCTCCATTGAGCAGAAGGAAGAATCCAAAGGGAACGATGTTAGCGTTAAGCGGATCAAGGAGTATAGGAACAAAGTTGAATCTGAGTTGTCTAACATCTGTACTGATATCATGACTGTTATTGATGAACACCTTATCCCTTCTTGTTCTGGTGGTGAACCTAGTGTGTTCTTCTATAAGATGAAGGGCGACTATTATCGGTATCTGGCTGAATTCAAGTCTGGAGATGAGAGAAAGGAGGCTGCTGATCAGTCCATGAAAGCATATCAGGCGGCTTCTACTACTGCCGAAGCTGAGTTACCTCCAACGCATCCCATTAGATTGGGTTTGGCTTTGAACTTCTCTGTTTTCTATTATGAAATTTTGAACTCTCCTGAAAGGGCCTGTCACCTTGCTAAGCAGGCATTTGATGTAGCAATTGCTGAGTTGGATACTCTAAGCGAAGAGTCTTACAAAGACAGCACATTAATTATGCAGCTTCTGAGGGACAACCTTACCTTGTGGACCTCTGACATCCCTGAAGATGGAGCTGATGAACAAAAGGTAGAGTCCGCACAAGCTACCCAAGGGGAAGACTGA 780 0.459 MASPTKERENFVYTAKLAEQAERYEEMVDAMKNVAKLNVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEESKGNDVSVKRIKEYRNKVESELSNICTDIMTVIDEHLIPSCSGGEPSVFFYKMKGDYYRYLAEFKSGDERKEAADQSMKAYQAASTTAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDVAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGADEQKVESAQATQGED* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4298 259 SMART 1433_4 8 249 IPR023410 -
Ahy3g4298 259 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Ahy3g4298 259 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Ahy3g4298 259 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Ahy3g4298 259 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Ahy3g4298 259 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Ahy3g4298 259 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Ahy3g4298 259 PANTHER 14-3-3 PROTEIN 5 247 IPR000308 -
Ahy3g4298 259 PIRSF 14-3-3 2 249 IPR000308 -
Ahy3g4298 259 Gene3D - 1 251 IPR036815 -
Ahy3g4298 259 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Ahy3g4298 259 Coils Coil 14 34 - -
Ahy3g4298 259 Pfam 14-3-3 protein 15 236 IPR023410 -
Ahy3g4298 259 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Ahy3g4298 259 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Ahy3g4298 259 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 5 247 - -
Ahy3g4298 259 MobiDBLite consensus disorder prediction 239 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4298 Ahy-Chr3 142965838 142968868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4298 6 257 14-3-3 family AT2G42590 80.159 1.99e-152 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4298 K06630 - gmx:100807980 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4550 13 145842804 145845713 Ahy3g4298 3 142965838 142968868 hybridization