Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4290 ATGGCTTCTCCAATTAGCGGAGGCTACTCTGGCTCTGGCTCTGAGGGAGATCCACAGCAGCATATAATGGATCAAAGGAAGAGGAAGAGAATGCAATCGAATCGGGAATCGGCGAGGAGATCGAGGATGAGGAAGCAGCAGCATCTTGATAGCCTGATTTCCCAGACTGATGAGCTGAAGAAGGAGAACAGCCAGATCAGCACAAGCATAGGGATCACCACAGAGCTTTATCTCAACATAGAATCTGAGAATGCAATCTTGAGGGCTCAGATGGCTGAACTTTCCAACAGGTTGCATTCTCTCAATGACATCATCAATTACATCAACTCTGTGTCTAGCACCACCACCGGCAACCACCACTTTCTTCATGCTCATGAGGCTCAGGAGACTCTTTTCAATGATTGTGGCTTCATGGACCCTTTCAACTCTCTGGCTGCTAATCAACCAATCATGGACATGCTCATGTATTGA 471 0.4713 MASPISGGYSGSGSEGDPQQHIMDQRKRKRMQSNRESARRSRMRKQQHLDSLISQTDELKKENSQISTSIGITTELYLNIESENAILRAQMAELSNRLHSLNDIINYINSVSSTTTGNHHFLHAHEAQETLFNDCGFMDPFNSLAANQPIMDMLMY* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4290 156 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 24 70 IPR004827 GO:0003700|GO:0006355
Ahy3g4290 156 SUPERFAMILY Leucine zipper domain 26 80 IPR046347 GO:0003700|GO:0006355
Ahy3g4290 156 Pfam bZIP transcription factor 26 84 IPR004827 GO:0003700|GO:0006355
Ahy3g4290 156 PANTHER BZIP TRANSCRIPTION FACTOR BZIP124 9 155 - -
Ahy3g4290 156 MobiDBLite consensus disorder prediction 1 65 - -
Ahy3g4290 156 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 29 44 IPR004827 GO:0003700|GO:0006355
Ahy3g4290 156 MobiDBLite consensus disorder prediction 1 19 - -
Ahy3g4290 156 MobiDBLite consensus disorder prediction 48 65 - -
Ahy3g4290 156 MobiDBLite consensus disorder prediction 20 47 - -
Ahy3g4290 156 PANTHER BZIP TRANSCRIPTION FACTOR 44 9 155 - -
Ahy3g4290 156 SMART brlzneu 22 86 IPR004827 GO:0003700|GO:0006355
Ahy3g4290 156 Gene3D - 24 78 - -
Ahy3g4290 156 Coils Coil 77 104 - -
Ahy3g4290 156 CDD bZIP_plant_GBF1 27 77 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4290 Ahy-Chr3 142920611 142921967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4290 19 156 bZIP Transcription Factor Family AT4G34590 50.000 4.67e-36 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy3g4290 bZIP_1 8.70E-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4542 13 145778969 145780346 Ahy3g4290 3 142920611 142921967 hybridization