Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4289 ATGGCGAAGGAGAAAGCAGGTGTCGTTTTATGGGTTTCTCATTCTCTCTCAACTCTCTTGCGGGAAAAGATGGCAACTTTAGTTGAGCCTCCTAACAAAATTAAGCCAAAGGGAAAGCATTATTATACAATATGGCAAACATTGTTCGAGATTGATACCAAGTACATTCCAATCAAGCCGATTGGTCGAGGTGCATATGGCGTGGTTTGCTCTTCCATCAATAGGGAGACTAATGAGAAGGTGGCAATCAAGAAGATTGGCAATATCTTTGATAACTGTATTGATGCACTGAGGACTTTGAGAGAGGTGAAGCTGCTAAGGCATATCCGGCACGAGAATGTCATTGCTTTGAAGGATGTGATGATGCCAATCCAGAGGACGACCTTTAAGGATGTTTATTTGGTCTATGAACTCATGGATACAGATCTTCACCAAATTATTAAGTCTTCGCAGCCACTCTCCAATGATCATTGCAAATATTTCTTGTTTCAGCTGCTTCGAGGTCTCAAATACCTTCATTCTGCAAATATTCTGCACCGGGACTTGAAACCTGGAAATCTGCTGGTTAATGCCAATTGTGATTTGAAGATATGTGATTTTGGCCTTGCGCGAACCAATGGAGCTGAGGGCCAGTTCATGACAGAGTATGTTGTCACCCGCTGGTATCGGGCTCCAGAGCTCCTGCTTTGCTGCGAAAACTATGGAACCTCTATTGATGTATGGTCAGTGGGATGCATTTTTGCTGAGATTCTTGGAAGAAAGCCAATCTTCCCAGGAAGTGAGTGCCTCAACCAGCTGAAACTGATCATAAGTGTACTTGGAAGCCAGCAAGAGTCTGATCTTGCATTTATTGATAACCCGAAGGCCAGGAGGTTTATCAGATCACTGCCGTATACAAGGGGTAGACCCTTTGCTCAACTATTTCCACAAGCCGACCCATTAGCAATTGATTTGTTGCAAAAGATGCTAGTATTTGATCCAACTAAGAGAATTTCTGTCTTAGAAGCACTCCAGCATCCGTATATGGCTGGCCTGTATGATCCAAGACTTAACCCTCCTGCTCAAGTTCCAGTCAATCTTGACATAGACGAAAACTGGGGCGAAGAGATGATTAGAGAAATGATGTGGAATGAGATGCTTCAGTATCATCCTGAAGCTGCTTCTGCCAATGTTTGA 1176 0.4337 MAKEKAGVVLWVSHSLSTLLREKMATLVEPPNKIKPKGKHYYTIWQTLFEIDTKYIPIKPIGRGAYGVVCSSINRETNEKVAIKKIGNIFDNCIDALRTLREVKLLRHIRHENVIALKDVMMPIQRTTFKDVYLVYELMDTDLHQIIKSSQPLSNDHCKYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTNGAEGQFMTEYVVTRWYRAPELLLCCENYGTSIDVWSVGCIFAEILGRKPIFPGSECLNQLKLIISVLGSQQESDLAFIDNPKARRFIRSLPYTRGRPFAQLFPQADPLAIDLLQKMLVFDPTKRISVLEALQHPYMAGLYDPRLNPPAQVPVNLDIDENWGEEMIREMMWNEMLQYHPEAASANV* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4289 391 CDD STKc_TEY_MAPK 49 384 - -
Ahy3g4289 391 SMART serkin_6 55 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g4289 391 ProSiteProfiles Protein kinase domain profile. 55 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g4289 391 Gene3D Transferase(Phosphotransferase) domain 1 139 368 - -
Ahy3g4289 391 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 26 388 - -
Ahy3g4289 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Ahy3g4289 391 Gene3D Phosphorylase Kinase; domain 1 42 378 - -
Ahy3g4289 391 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 26 388 - -
Ahy3g4289 391 Pfam Protein kinase domain 58 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g4289 391 SUPERFAMILY Protein kinase-like (PK-like) 47 349 IPR011009 -
Ahy3g4289 391 ProSitePatterns Protein kinases ATP-binding region signature. 61 85 IPR017441 GO:0005524
Ahy3g4289 391 ProSitePatterns MAP kinase signature. 90 193 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4289 Ahy-Chr3 142912723 142916020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4289 24 391 MAP Kinase Gene Family AT2G18170 83.424 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Ahy3g4289 Pkinase 4.70E-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4289 K20537 K20535 gmx:100783422 702.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3425 13 131595335 131599221 Ahy3g4289 3 142912723 142916020 hybridization