Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4250 ATGGAGTGCAAGAGCATCCAAAGCATGGCATCAAGTAGCACAAGACCCAAATATGACGTGTTTGTGAGCTTCAGAGGTGAGGACGTACGCAACACCTTCGCTGATCATCTCTTTGCCGCTTTCCGTAAAAACGGAATAGTTGCATTCAGGGACGATAGGAATCTGATGCAAGGACAGCACATCTCCACTGAGCTGGTACAAGCAATTGAAGGATCTCAGGTTCTCATTGTCATCTTCTCTAAGAACTATGCTACTTCTTCATGGTGCTTGCAGGAACTCGCTAAGATGCTTGATTGCAGCAATACGATAACAGAATCAAATCTGTTGCCTATTTTCTATGATGTTAGTCCGTCTGAGGTGCGTAAACAGACCGGAAACTATGGGAAAGCGTTGGCTGAGCATGAAGAAAGATTCAAAGATAACTCAAATATGGTGCAACAATGGAGGGAATCTCTGCTGCAAGTCTCTAATCTCTCTGGTTGGGATATACAAAATAAGCAGGAGAATGGAGAGATTGAAAAAATTGTTAAAAGGGTGAGAAGCAAATTAGGTTGCAATTCGGTAAGTGTGGATGGGTTGGTTGGGATGCAATCTCGTGTGGAAGAATTGGAAAACCTGATTGATTTCAACTCCGATAATGAAGTTCGGGTTGTAGGCGTTTGTGGCATGGGTGGGATAGGAAAGTCAACACTTGCTAGGGTCGTGTATGGTAGAAACCTTCATAAATTTGGTGCTCATTCTTTTGTTGACGATATAAGCAAAGTTTTTCGTGGAGGTGGTCTACTTTCTCTACAAAAGCAACTTGTTTGTCAAATTACAAATGGAGAGATCCAAGATATATACAATCATTACCAGGCTGAGAGTTTGATAAAAACTATGCTACGCTGTCAAAAGGCTCTGATTGTTCTAGATAATGCCGATGAAGTTGAACAGTTAGAGAACCTTGGCGTGACTCGTGATTGTCTATGTCCAGGAAGCAGAATTGTAGTAACTTCTAGAGATCAACATGTCTTGAACTCTTTTGGGCTAGATGAAACATACAAAGTTCAACTCTTGAATGAGGATGAAGCTCATCAATTGTTTTGTGAAAAAGCTTTTGATGATAATATAATTATGAGTCGTGACGAGATTAGCAGAGAGTACAAAAAGTTGACGGATCTTGCACTTAAATATGCTCAAGGCCTTCCCTTGGCAATTAAAGTTTTGGGGTCATATCTACGCAGTCGAGATATCTCTGTATGGAGAAGTGCCCTAGATAGACTGAAAAATAATCCAAAGAAGGAAATCGCAGATGTGCTTCAACTTAGTTTTGATGGATTGGAACCCCTCGAAAAGGAAATATTTTTGGACATTGCTTGTTTCTTTAACCACGAACCTAAATGGATTGTGGAAGACATGTTGTACTGTCGTGGTCTTCATCCAAAGATTGGAATAAGTGTACTTACGGATAAATCATTAATAACAATTGATGAATGTGGCGATATTAGAATGCATGACCTGTTGCGAGAGTTAGGCATGAGAATAGTTCGGCAAAGTGCTCCAAATGAGCCATGGAAGTGGAGTAGGATATGGAGCAAAGAGGATTTTCAACGTATTATGTTTGGAAATACGGTAACTGATGATGTTAAGGCCGTGCAATTGGAGGGATCATATGAAGAAAGAAATATGACATTAAGAGCAGAAACATTATCAAGAATGAGACGACTTGAATTTCTCAAAATAAAAAAAGTTAGTTTTTCTGGAAGTTTTAATAGCATTTCTAGCGAATTGCGATATCTTGAGTGGGAAGAGTATCCGTTTACGTATTTTTCATCATGTTGTAAGCTATCCAAGCTTTCGAAATTAGTCTTGCAAAACAGCAACATCAAGCAACTATGGGATGGCACAATGTGTCTGGACAATTTGAAGGAATTGAATCTCTCTGACTCCGAAAATCTTGTGAAGCCTCCAAACCTTAGCCAGGCTCCAAATCTTGAGCGGCTGTTCCTTAGAGGATGTAGAAAGCTTAAGCACATACATCCATCAACTGGAGACCTAAGAAAACTTCTTGTGTTAGATTTGAGTGGGTGCACAAGTTTAATGAGTTTTCCCATCACTATATTTGGTATATCTTCACTAAAATACGTTAATCTGAGCGGGTGCTCAAGATTATTTGGTGGGAAAGAGTTGGAAAATGGAAGTGAGAGTAGTATCCAATGCCAATCGACAGTATGGTCCACTTTTAAAAGGCTTAAGCTTAGGTTACCATTCCATTTCTTCAATTCTTCTAAAAGTAGATACAACCATGCGTTCCATCTGTGGAGGCTTTCTGTGGCTCGCTTAAGCTGCGTGTATTATCTTGACCTAAGTTATTGTAATCTGCATACTATCCCTGAGGCCATATCATCCTTACATTATTTAGAGTTCTTATATTTCACGGGAAACAATATAGTTAGAGTACCTGATTTCATAAACAAGCTTCCCAGACTGAGAGTGTTGGAGTTAGATAACTGCAAACGGCTAATGTATGTAGATGAGTTCCCATTACCATTACCATTACCCTATCCAGCGGCAGAGCGAACAAAACTTGTGAAATGGGGAGAATGGAGGATGTTGAACTGCCCGAAAATAGTAGAGAAGGAAAGGTTGAGTGGAATGGGAAGTTCATGGATGAGAGAGTACATTAAGGTACACAATGAATCCACTGGTTTCCTTGCTATTGTAATACCAGGGAGTGGAGTTCCAATTCCAAGGTGGTTTAAGCATCAGAATAAGGGGGCGGATAATTCAATGTGGATAGAATCATTTCCGAATGCCAATGACAACAATTGGATTGGCATTGCCCTTTGTGCCCAGATTGCTGTTCAATTGGATAGAACCATTTCCATTAACCTCTACTTTTACGACCAAACAGGAAAAGGCAACCTCGTGTACAGTATCTTTTGGCCTAAAAAGGAGGAGGAGGTGAGGGGTGAATTGGTTCAGCTCTGCCTATTCTATTTTTCTCGCCAACTACTCATTCAGGATGGAAAGCAGCATGATCTTGATGGATCCCGCTTTGAATTCAAAGTAGATTACCAAAGCTATGTCGATAATGAGCGTTTGGAAGTGAAGAAGTGGGGAATGCGTGTGGTACTGAACCAGGATTTGGAGTAA 3135 0.4032 MECKSIQSMASSSTRPKYDVFVSFRGEDVRNTFADHLFAAFRKNGIVAFRDDRNLMQGQHISTELVQAIEGSQVLIVIFSKNYATSSWCLQELAKMLDCSNTITESNLLPIFYDVSPSEVRKQTGNYGKALAEHEERFKDNSNMVQQWRESLLQVSNLSGWDIQNKQENGEIEKIVKRVRSKLGCNSVSVDGLVGMQSRVEELENLIDFNSDNEVRVVGVCGMGGIGKSTLARVVYGRNLHKFGAHSFVDDISKVFRGGGLLSLQKQLVCQITNGEIQDIYNHYQAESLIKTMLRCQKALIVLDNADEVEQLENLGVTRDCLCPGSRIVVTSRDQHVLNSFGLDETYKVQLLNEDEAHQLFCEKAFDDNIIMSRDEISREYKKLTDLALKYAQGLPLAIKVLGSYLRSRDISVWRSALDRLKNNPKKEIADVLQLSFDGLEPLEKEIFLDIACFFNHEPKWIVEDMLYCRGLHPKIGISVLTDKSLITIDECGDIRMHDLLRELGMRIVRQSAPNEPWKWSRIWSKEDFQRIMFGNTVTDDVKAVQLEGSYEERNMTLRAETLSRMRRLEFLKIKKVSFSGSFNSISSELRYLEWEEYPFTYFSSCCKLSKLSKLVLQNSNIKQLWDGTMCLDNLKELNLSDSENLVKPPNLSQAPNLERLFLRGCRKLKHIHPSTGDLRKLLVLDLSGCTSLMSFPITIFGISSLKYVNLSGCSRLFGGKELENGSESSIQCQSTVWSTFKRLKLRLPFHFFNSSKSRYNHAFHLWRLSVARLSCVYYLDLSYCNLHTIPEAISSLHYLEFLYFTGNNIVRVPDFINKLPRLRVLELDNCKRLMYVDEFPLPLPLPYPAAERTKLVKWGEWRMLNCPKIVEKERLSGMGSSWMREYIKVHNESTGFLAIVIPGSGVPIPRWFKHQNKGADNSMWIESFPNANDNNWIGIALCAQIAVQLDRTISINLYFYDQTGKGNLVYSIFWPKKEEEVRGELVQLCLFYFSRQLLIQDGKQHDLDGSRFEFKVDYQSYVDNERLEVKKWGMRVVLNQDLE* 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4250 1044 Pfam C-JID domain 906 1044 IPR045344 -
Ahy3g4250 1044 Gene3D - 190 344 IPR027417 -
Ahy3g4250 1044 Gene3D - 351 441 IPR042197 -
Ahy3g4250 1044 Pfam NB-ARC domain 199 427 IPR002182 GO:0043531
Ahy3g4250 1044 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 641 834 IPR044974 GO:0006952
Ahy3g4250 1044 Gene3D Ribonuclease Inhibitor 553 743 IPR032675 -
Ahy3g4250 1044 Gene3D Ribonuclease Inhibitor 767 847 IPR032675 -
Ahy3g4250 1044 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 634 - -
Ahy3g4250 1044 SMART till_3 17 158 IPR000157 GO:0007165
Ahy3g4250 1044 SUPERFAMILY L domain-like 496 836 - -
Ahy3g4250 1044 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 634 IPR044974 GO:0006952
Ahy3g4250 1044 Pfam TIR domain 17 182 IPR000157 GO:0007165
Ahy3g4250 1044 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 641 834 - -
Ahy3g4250 1044 PRINTS Disease resistance protein signature 392 406 - -
Ahy3g4250 1044 PRINTS Disease resistance protein signature 677 693 - -
Ahy3g4250 1044 PRINTS Disease resistance protein signature 217 232 - -
Ahy3g4250 1044 PRINTS Disease resistance protein signature 293 307 - -
Ahy3g4250 1044 ProSiteProfiles TIR domain profile. 16 183 IPR000157 GO:0007165
Ahy3g4250 1044 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 161 IPR035897 -
Ahy3g4250 1044 Gene3D - 11 189 IPR035897 -
Ahy3g4250 1044 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 451 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4250 Ahy-Chr3 142544740 142549258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4250 13 805 WRKY Transcription Factor Family AT4G12020 27.458 4.48e-68 248