Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4224 ATGCATGGTGGAAGCAAAGACATGTCCAATAACAATCAAAGGACAGAGTCAATGGAAAATAGTAGCTTTGAAGCGCTCGAAGAATACGGGAGCAAACCCTATGACAGAACATGCTTCTACCGTCTTCAGGTGGTGGCGTTGAAGTCGAAGACGAGGAGAAATCGAGGGAGATGGTTTCTCAGGTGTCCTCTATGGAAGATGAAGAACAGTGGGTGCCGTTATTTTCAGTGGACGGATGAAACCAACGAGAAATCTATTGGGCTGGAAGAATCATCTAAAAATGGAACACTAGATAAAGGAGAAATGGGACTGAAGGCCTTAACAGATGCCACGTTTAAATTCCATCTGCCACATTACCAAGCTCCGTTTAACGGAGAAGGGCTCTTTTCACGTGTGAAGGTGAAGCGGATGAAAGAAGAAAGAGAGCATTCCAACTCATGGCATCCGACGGAGCTCGGCCCCAAGTCCGACGGCCAGATCGAGTGGCTCCTCCGCCAAGCCGAGCCCTCAATCATCGCCGCTACCAGAACCAGAACCACTCCCGCCAGCTTCTCTTCCGTTTCCGTCTCCGTACGCGGCGCGTCTTCGCTCGACCACAAGCCCTTGCTGGCTCCCACTCCCTTCATACTCGGCAAGCGCATACACACCGACGACGACGCTTCCGCCAAGGACGACGGCGTCTCCGTGGGGTCCTTAGTGGGCCCTGGAGCTCCTGCGGGGCTCTGGGCCCTCCCGGCCAGGCCCGATTTTGGTCAAATTTGGAGTTTCGCAGCGGCTGCTCCTCCGCTGGAGATGCAACAAGCTTCTTTGTTTGTTCACCATCGGCATCAGCAGCAGCAACAAGCCATGGGAGAAGCTTCGACGGCGAGGCTAAGAAATTACCTTCCTGTACATCTAAATTTGCTGGCTTCTAAGTCGGGAAGCTCCGGAAAATTTTAG 939 0.5272 MHGGSKDMSNNNQRTESMENSSFEALEEYGSKPYDRTCFYRLQVVALKSKTRRNRGRWFLRCPLWKMKNSGCRYFQWTDETNEKSIGLEESSKNGTLDKGEMGLKALTDATFKFHLPHYQAPFNGEGLFSRVKVKRMKEEREHSNSWHPTELGPKSDGQIEWLLRQAEPSIIAATRTRTTPASFSSVSVSVRGASSLDHKPLLAPTPFILGKRIHTDDDASAKDDGVSVGSLVGPGAPAGLWALPARPDFGQIWSFAAAAPPLEMQQASLFVHHRHQQQQQAMGEASTARLRNYLPVHLNLLASKSGSSGKF* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4224 312 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 150 310 - -
Ahy3g4224 312 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 150 310 IPR005333 GO:0003700
Ahy3g4224 312 MobiDBLite consensus disorder prediction 1 22 - -
Ahy3g4224 312 Pfam TCP family transcription factor 151 215 IPR017887 -
Ahy3g4224 312 Pfam GRF zinc finger 41 80 IPR010666 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4224 Ahy-Chr3 142212563 142216108 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4224 151 309 TCP Transcription Factor Family AT5G23280 62.644 3.99e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy3g4224 TCP 2.50E-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4224 K16221 - gmx:100799005 201.83