Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4206 ATGGCAACCGGTGATGATTACAATATTGATGATTTGTTTCAAGAAGCTCAAAGCAGATGGCTGAAGCCTGTGGAAGTGATGTACATTTTACAGAATCATGACAAGTACCAGTTCACACAAGAGCCCCCTCAACAACCAACAAGTGGATCACTTTTTCTCTTTAACAGAAGAGTCCTGCGCTTCTTTCGTAGAGATGGCCATAACTGGCGCAAGAAGAAAGACGGAAGGACTGTCGGAGAGGCACACGAACGCCTTAAGGTTGGAACTGTCGAAGCCTTAAATTGTTACTATGCACATGGAGAGCAGAACCCTACTTTCCAGAGGCGGAGCTATTGGATGTTGGATCCGGCATTTGAGCATATTGTTCTTGTGCATTATAGAGAAACAAGTGAGGGAAGGTCCAGCTCTGGACCTGGCACACAATTGTCACCAAGTTCCTCTTCTGCATTTGGCCAGAGTCCTAGCTCATATTCTGCTCAGACACCATTGTCAACATCTGTACTTGGTGATCCATATGAACCTAATCAGAGTTACTCTAGTTCTGGCACCGGAGAAGTTACCTCTGATGTATTCATCATGAATGATGGAATGAGTCACCTGGATGGGACATATGCAGACTCAGGAACTTCAACTGAAGTTGAGGTTACTCGAGCTTTGTTGCGCAGATTGGAGGAGCAGTTAAGTTTGAATGAAGACAGCATCAAAGAAATTGCTTCCTTCTACGGTGAGAAAGAAATTACAGGTGATTCAAATGCTCAACAAAATCAAGGGTTGACCTGTAAGCAAGAGGAATCTGCAGCTTTTGCTAGACCAGATGATTATGGGCTAATTTTTTATGGACATAATGGAACCCAAGATGAAGGTGATAAGTCTTATGAATTAATGGACCATACATACCGTGATGGAAATGAAAAGGATATATGGACAGAGGTGCTGGAATCATGCAAGTCGTCATCCACAGCCAGGTTACCACAGAAAAATGTATACATGCCAGCCGGAAAAATCATCATTGTTGGGTCTTTTCTGTGTCATCCTTCAGATTCTGCCTGGGCTTGTATGTTTGGTGATGTTGAAGTTCCCATTGAGATAATTCAGGACGGTGTAATCAGTTGTGAAGCTCCATCTCGCCTTTCTGGAAAGGTTAATCTCTGCATTACTTCTGGTAATAGGCAGTCCTGCAGTGAAGTCAGAGAGTTTGAGTATCGTAATAAGACAAGTATTTGCACTTACTGTAACTCATCGGCAACAGAAGCCAACAGAAGTCCAGAAGAGCTGCTGTTACTCGTTAGATTTGCACAGATGCTGCTTTCTGGTTCAACTACAAAGAATGATGACATAGAATCTGGAACTCATCTAGTAAAACAGAAAGCCGATGATGATTCATGGAGCCATATTATAGAGGCTCTTCTAGTGGGCAGTGGAACTTCATCTGGTATGGTCGATTGGCTTCTCGAAGAGCTTCTTAAGGATAAGCTGCAGCTGTGGCTTTCTTGCAGGTCCCAGGAGAAAGATGAAGTAACAGGCTGTTGTTTGTCGAAGAAAGAGCAGGGAATCATTCACATGGTAGCTGGATTGGGTTTTGAGTGGGCCTTGCACCCTATTCTCAGTTGTGGTGTGAATATAAATTTCCGTGACATTAACGGATGGACTGCCCTTCATTGGGCTGCACGTTTTGGAAGAGAAAAAATGGTTGCTTCACTTATAGCTTGTGGTGCATCTGCTGGAGCAGTGACAGATCCAAGTGCACAAGATCCGAAAGGAAAAACTGCTGCATCTATTGCAGCGAGCAGTGGACATAAGGGACTGGCAGGATATCTTTCTGAGAGAGCTCTGACAAGCCATCTGTCATCCCTCACACTGCAAGAGAGTGAGCTATCCAAAAGTTCTGCACAATTCGAAGCAGATTTAGCTGTTAGTAGTGTCTCCAAGGAAAATCTCGCTGCCGGTGAGGATCAGGCTCCACTTAAACATACCTTGGCTGCTGTCAGAAATGCAACTCAGGCCGCAGCACGTATACAATCTGCTTTTCGTTCGCATTCCTTCAGAAAGCGGAGAGCAAGAGAAGCTGCTGCTGCCACTGCTGGTGGTATCAACGCAGGTAGCATTGGTAACATTCCGGAGCTTTCCGCAATGTCAAAACTTGCCTTTCGGAACTCACGGGATCACAATTCTGCTGCCTTATCTATTCAGAAGAAATTTCGAGGTTGGAAGGGTCGCAAAGATTTCTTAGAATTGCGCCAAAAAGTAGTGAAGATACAGGCTCATGTGAGGGGTTACCAGGTTAGAAAGCATTACAAGGTGATATGGGCAGTTGGAATCTTGGACAAGGTTGTCCTGCGATGGCGGAGAAAAGGAGCTGGCCTACGAGGTTTCCGACAGGAGATGGAGACCAGTGCCTTGGATGAAAGTGAAGATGAAGATATTCTCAAGCCTTTTCGCAAACAGATGGTAGATGCAGAAATAAAAGAGGCCGTGTCAAGGGTGCTTTCCATGGTTGATTCTCCAGATGCTCGTCAGCAATATCATCGCATGCTTGAGAAGTATCGTCAAGCTAAGGCTGAACTTGCGGGTACGAGTGAGGAAGCATCATTGTCAACGTCCATTGCGGATGTTTTCAGTATGGAAGATGATATGTATCAGTTTCCTCAGGGCTAA 2655 0.4482 MATGDDYNIDDLFQEAQSRWLKPVEVMYILQNHDKYQFTQEPPQQPTSGSLFLFNRRVLRFFRRDGHNWRKKKDGRTVGEAHERLKVGTVEALNCYYAHGEQNPTFQRRSYWMLDPAFEHIVLVHYRETSEGRSSSGPGTQLSPSSSSAFGQSPSSYSAQTPLSTSVLGDPYEPNQSYSSSGTGEVTSDVFIMNDGMSHLDGTYADSGTSTEVEVTRALLRRLEEQLSLNEDSIKEIASFYGEKEITGDSNAQQNQGLTCKQEESAAFARPDDYGLIFYGHNGTQDEGDKSYELMDHTYRDGNEKDIWTEVLESCKSSSTARLPQKNVYMPAGKIIIVGSFLCHPSDSAWACMFGDVEVPIEIIQDGVISCEAPSRLSGKVNLCITSGNRQSCSEVREFEYRNKTSICTYCNSSATEANRSPEELLLLVRFAQMLLSGSTTKNDDIESGTHLVKQKADDDSWSHIIEALLVGSGTSSGMVDWLLEELLKDKLQLWLSCRSQEKDEVTGCCLSKKEQGIIHMVAGLGFEWALHPILSCGVNINFRDINGWTALHWAARFGREKMVASLIACGASAGAVTDPSAQDPKGKTAASIAASSGHKGLAGYLSERALTSHLSSLTLQESELSKSSAQFEADLAVSSVSKENLAAGEDQAPLKHTLAAVRNATQAAARIQSAFRSHSFRKRRAREAAAATAGGINAGSIGNIPELSAMSKLAFRNSRDHNSAALSIQKKFRGWKGRKDFLELRQKVVKIQAHVRGYQVRKHYKVIWAVGILDKVVLRWRRKGAGLRGFRQEMETSALDESEDEDILKPFRKQMVDAEIKEAVSRVLSMVDSPDARQQYHRMLEKYRQAKAELAGTSEEASLSTSIADVFSMEDDMYQFPQG* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4206 884 Pfam CG-1 domain 15 128 IPR005559 GO:0003677
Ahy3g4206 884 Gene3D - 722 770 - -
Ahy3g4206 884 ProSiteProfiles IQ motif profile. 665 694 IPR000048 GO:0005515
Ahy3g4206 884 Gene3D Immunoglobulins 324 406 IPR013783 -
Ahy3g4206 884 SUPERFAMILY E set domains 334 402 IPR014756 -
Ahy3g4206 884 SMART ANK_2a 547 576 IPR002110 GO:0005515
Ahy3g4206 884 SMART ANK_2a 586 615 IPR002110 GO:0005515
Ahy3g4206 884 ProSiteProfiles IQ motif profile. 745 770 IPR000048 GO:0005515
Ahy3g4206 884 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 5 328 - -
Ahy3g4206 884 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 332 878 - -
Ahy3g4206 884 SMART CG_1_2 12 130 IPR005559 GO:0003677
Ahy3g4206 884 SMART iq_5 721 743 IPR000048 GO:0005515
Ahy3g4206 884 SMART iq_5 664 686 IPR000048 GO:0005515
Ahy3g4206 884 SMART iq_5 744 766 IPR000048 GO:0005515
Ahy3g4206 884 MobiDBLite consensus disorder prediction 130 185 - -
Ahy3g4206 884 Pfam Ankyrin repeats (3 copies) 532 608 IPR002110 GO:0005515
Ahy3g4206 884 ProSiteProfiles IQ motif profile. 722 751 IPR000048 GO:0005515
Ahy3g4206 884 Gene3D - 433 618 IPR036770 -
Ahy3g4206 884 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 4 5 328 - -
Ahy3g4206 884 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 4 332 878 - -
Ahy3g4206 884 SUPERFAMILY Ankyrin repeat 515 608 IPR036770 -
Ahy3g4206 884 Pfam IQ calmodulin-binding motif 747 766 IPR000048 GO:0005515
Ahy3g4206 884 Pfam IQ calmodulin-binding motif 724 742 IPR000048 GO:0005515
Ahy3g4206 884 ProSiteProfiles CG-1 DNA-binding domain profile. 9 135 IPR005559 GO:0003677
Ahy3g4206 884 ProSiteProfiles Ankyrin repeat profile. 547 579 IPR002110 GO:0005515
Ahy3g4206 884 ProSiteProfiles Ankyrin repeat region circular profile. 547 573 - -
Ahy3g4206 884 Pfam IPT/TIG domain 346 401 IPR002909 -
Ahy3g4206 884 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 713 768 IPR027417 -
Ahy3g4206 884 Coils Coil 841 861 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4206 Ahy-Chr3 142035990 142041379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4206 334 882 CAMTA Transcription Factor Family AT1G67310 62.837 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Ahy3g4206 CG-1 4.50E-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4206 K21596 - egt:105952629 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4489 13 145109473 145114850 Ahy3g4206 3 142035990 142041379 hybridization