Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4174 ATGGACTCCGATTCAGACTCTGACGGATCCCATGTCTCTGCAACTCCTCCACGACGAGCAACTCCATCACCGCCGCCACAACCACCTCGTGTTCCTTCCGGAAAATCTAGAATCAGAACCAAAACCTCGAGCTCCAAGAAGCGCCCTTCTGCACCCGATAAAATCCAATCCAAACACGATCCGCTACCCGAACCAAGCCACCAACTCCAAGACCCTTTCTCCCTCCCGACCGCTCTACCGTTTCAAATTCGTCGGTCCTCCGACTGTGACCCCGCACCCCCGTCCACTTCCCAGCCCCTCGAAACCCTCCCGGCGGGGTTCTTCTCCAAATCCGCTTCCTTCTCGAAGATCCGAAGACATTCTATAAGTTTTGAAGCTTCTGGAAACGAACCGCTACTCGATTCTACGTCCAATCTGGGCACCAATGTTGGACTTGATTATGCTCGTGCTTTCCCCAAAGGAGAAAAGGGGAAATGTGGAAGGAGAGAAGAAGAAGGACTCGGGTTTGGTTCCAGAGATAAGAGGAAATTTGGAAAGATAGAAGAAGAGGAAGAAAGAGGAGGACTTGGAGCTGTTTCTAGAGAAAAGGAGAGCTTTGGAAAGAGAGGAGAAGCAGAAGAAGGATTTGGAGTTGGAGTTGGTTCTAGAGTAAAGGGGACATCCGGGAAGAGGCAGCATCCTAACCTGATAGGGGCAAATGCACCATTGCCAGCCGTGAAGCTGCGAAAATGTGGCGGGGAAGGGAACTTTGTGAAATTGAACTTGAGTGGTGGTGGTAAGAGGAGGAAGTTTATGAACAAGGGGTACAAGAAAAGTGGGAGATTTTCTGGTGGTAGAAGGTACACAAGAAGAAGTAGAGGTAAAGTGGGACGTCAAGGGAAGGAGGATCAAGAGGAACTTGGTTTTGATGATGAAGAAGGGTTGGTTACAGAGAGTGGGCAAAAGAAGCAAAAGCAGACTTGCAGAGCTAGTGAGGTTCAGTTGAAATTGGTGGACGAGGCAGTGTCTGCTGCTCAAGCTGAGCCTTCGGATGAGAATTTGGTGAACTTGCTGAGCTTGGTTTATGGCTATGATAGTTTTCGAGATGGGCAGCTGGAGGCAATCAAGATGGTTCTTACCGGGAAGTCTACCATGCTTATTTTGCCAACTGGTGCAGGGAAGTCACTCTGCTATCAGCTGCCTGCCTTGATTTTGCCTGGGATTACCCTAGTTGTCAGTCCACTGGTGGCCTTGATGATTGATCAGCTAAGGCAACTGCCCCCTGTGATTAGGGGTGGTTGTTTAAGCAGCAGTCAGACATCTGAGGAAGCAGCTGAAACACTCAACCAGCTTAGACAAGGTGCAGTGAAGGTGCTTTTTGTTTCCCCAGAGCGCTTCCTGAATGAGGAGTTTCTGTCTGTTATTTCTGGTATGTCAGGCATCTCACTTCTTGTTGTTGATGAAGCACACTGTATTTCTGAATGGTCTCACAATTTCCGACCATCATTCATGAGACTTAGAGCATCTTTGCTCCGTAAAAGGCTTAACGTAGGTACTATTCTTGCAATGACAGCAACTGCTACAAACACAACTTTAGATGCCATCATGTCTGCTCTAGATATTCCTTGCACAAATATTATTCAAAAGACACAACTAAGGGACAATTTTCATTTATCGGTGTCTTTGCTGAAAAATAGAATGAAAGACCTTCTGGTTCTCATGAAGTCTTCTCCTTTTGCTGAAGTTCAAAGCATTATCATATACTGCAAATTTCAGTCTGAAACTGATTTGATTAGCCGATACTTGAATGATAACAATATCTCGGCAAAGAGTTATCATGGTGGTATGAGTTCAAAGGAACGCAACTATGTCCAAGAGTTGTTTACCTCCAACAAGATCAGAGTGGTTGTTGCAACTGTGGCATTTGGTATGGGACTGGATAAAAGTGATGTTGGAGCTGTAATTCATTATAGTCTGCCTAAAAGTCTGGAGGAGTATGTGCAGGAGATAGGCCGTGCTGGAAGGGATGGGAGGTTGTCCTATTGTCACCTATTCTATGATGATGAAACATATTTCAAACTTCGCAGTCTAATGTACAGTGAAGGAGTAGATGAATACACAGTGAACAAATTTCTGCATGAAGTGTTTCCTGCTGAGAAGAGCTCCTGTGGGAGAATATGTTCGTTAATTAAAGAATCTTCTTCACGCAAGTTTGATATGAAAGAAGAGGTGATGCTAACAATTTTGACACGCTTGGAGTTGGGAGATGTGAAGTACTTGTATTTACTTCCACAGATAAATGCAACTTGCAATTTGACATTTCATAAGACTCCCCCACCTATGCTTGCCCAAAGGAATTATGCTGTTGCTGTTATTCTGAAGAGATCTGAATATAAGCAAGGGCTGTATGTTTTTGACATTCCATCCGTGGCAAATGACGTGGGGGTTACAGCAGTTGAGTTAACAAATCAGTTGTACAATCTCAAGTTAACGGGAGAAATAACTTATGAAATGAAGGATTTGGCCTACTGTTATAAGATTATTCAAGTCCCGACGGACTTTTTCTCGCTATCAACAGCTGTTACCCAATGGTTATCAGATGTTGAAAGTTGTAAGGTACAAAAGATAGATGTAATGCTTAATGCTGCAAATTTTGCCATAAATTTATGTGACAAGATGCATGGTTGCAGTGATAACAATCACACACCATGCTTGCAAACGAAAATATTGGATTACTTTGCTGGAGTTGATGATAACAATGATTCCTGCAAGAAAATTGGTCAAAGCAGCCCTTTCCTGCGGGCTGATATTAAGGTCTTTCTTCAGAGCAATTCACAAGCAAAATTTACACCAAGAGCTGTGGCCAGGATAATGCACGGAATTGCAAGCCCGGCATATCCTTCTACCATTTGGTGTAGAACCCATTTTTGGGGAAGGTATACACATATAGACTTCAAGGTGGTGATGGAAGCAGCAAAGGCAGAACTGAAGAATTTGGTTGGAAAAGATACGCTCTAG 2997 0.4418 MDSDSDSDGSHVSATPPRRATPSPPPQPPRVPSGKSRIRTKTSSSKKRPSAPDKIQSKHDPLPEPSHQLQDPFSLPTALPFQIRRSSDCDPAPPSTSQPLETLPAGFFSKSASFSKIRRHSISFEASGNEPLLDSTSNLGTNVGLDYARAFPKGEKGKCGRREEEGLGFGSRDKRKFGKIEEEEERGGLGAVSREKESFGKRGEAEEGFGVGVGSRVKGTSGKRQHPNLIGANAPLPAVKLRKCGGEGNFVKLNLSGGGKRRKFMNKGYKKSGRFSGGRRYTRRSRGKVGRQGKEDQEELGFDDEEGLVTESGQKKQKQTCRASEVQLKLVDEAVSAAQAEPSDENLVNLLSLVYGYDSFRDGQLEAIKMVLTGKSTMLILPTGAGKSLCYQLPALILPGITLVVSPLVALMIDQLRQLPPVIRGGCLSSSQTSEEAAETLNQLRQGAVKVLFVSPERFLNEEFLSVISGMSGISLLVVDEAHCISEWSHNFRPSFMRLRASLLRKRLNVGTILAMTATATNTTLDAIMSALDIPCTNIIQKTQLRDNFHLSVSLLKNRMKDLLVLMKSSPFAEVQSIIIYCKFQSETDLISRYLNDNNISAKSYHGGMSSKERNYVQELFTSNKIRVVVATVAFGMGLDKSDVGAVIHYSLPKSLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSLMYSEGVDEYTVNKFLHEVFPAEKSSCGRICSLIKESSSRKFDMKEEVMLTILTRLELGDVKYLYLLPQINATCNLTFHKTPPPMLAQRNYAVAVILKRSEYKQGLYVFDIPSVANDVGVTAVELTNQLYNLKLTGEITYEMKDLAYCYKIIQVPTDFFSLSTAVTQWLSDVESCKVQKIDVMLNAANFAINLCDKMHGCSDNNHTPCLQTKILDYFAGVDDNNDSCKKIGQSSPFLRADIKVFLQSNSQAKFTPRAVARIMHGIASPAYPSTIWCRTHFWGRYTHIDFKVVMEAAKAELKNLVGKDTL* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4174 998 MobiDBLite consensus disorder prediction 1 104 - -
Ahy3g4174 998 SMART helicmild6 589 670 IPR001650 -
Ahy3g4174 998 Gene3D - 538 738 IPR027417 -
Ahy3g4174 998 CDD SF2_C_RecQ 546 679 - -
Ahy3g4174 998 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 368 538 IPR014001 -
Ahy3g4174 998 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 400 688 IPR027417 -
Ahy3g4174 998 MobiDBLite consensus disorder prediction 263 287 - -
Ahy3g4174 998 Pfam Helicase conserved C-terminal domain 575 669 IPR001650 -
Ahy3g4174 998 MobiDBLite consensus disorder prediction 89 104 - -
Ahy3g4174 998 Pfam DEAD/DEAH box helicase 362 524 IPR011545 GO:0003676|GO:0005524
Ahy3g4174 998 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 350 719 IPR004589 GO:0004386|GO:0006310
Ahy3g4174 998 MobiDBLite consensus disorder prediction 262 302 - -
Ahy3g4174 998 SMART ultradead3 356 552 IPR014001 -
Ahy3g4174 998 MobiDBLite consensus disorder prediction 178 231 - -
Ahy3g4174 998 MobiDBLite consensus disorder prediction 178 204 - -
Ahy3g4174 998 CDD DEXHc_RecQ4-like 348 541 - -
Ahy3g4174 998 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 559 716 IPR001650 -
Ahy3g4174 998 PANTHER DNA HELICASE RECQ FAMILY MEMBER 52 922 - -
Ahy3g4174 998 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 475 484 IPR002464 -
Ahy3g4174 998 Gene3D - 326 537 IPR027417 -
Ahy3g4174 998 MobiDBLite consensus disorder prediction 18 32 - -
Ahy3g4174 998 MobiDBLite consensus disorder prediction 46 65 - -
Ahy3g4174 998 PANTHER ATP-DEPENDENT DNA HELICASE Q4 52 922 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4174 Ahy-Chr3 141686977 141692509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4174 579 702 Eukaryotic Initiation Factors Gene Family AT3G19760 33.333 1.81e-15 78.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4456 13 144683347 144688963 Ahy3g4174 3 141686977 141692509 hybridization