Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4168 ATGTTTACTCTTCTGCTGTCTCTGAACTTTCCAGTGTTTCCTTCAACTTCAACCATGGCCATTGTGGATACTCTGCTTGTAACAGCCAATGTGGCATTCTTCTATGCAATTCTGATATGGCTGCTTCTTCACACTTTGAGACAAAGCAAGCTTCAACGTGCTGTGTTTCTCCAACAAGGACCAAAATTCTTCTCCATTATCACTCTCCTATTCAATTTCATTCTTACCCTTTTAACTATAGCTTTTGCAGTTCATGAATATAGGACTAATAAAATAGTGAGATATAGTTCTGTTACATTTGCTCTAACATGGGTTATGGCAAGCTTGGTTTCATTCTATTCAATGAAGAAGACAACAAGAGATAACAAAAGATTCCCTTTTGTTCTGGTTCTCTGGTGGGTCTGGGCCAGTATCATAGAGGCAATCTCAGTTTCTATTGGACTAATGAAGAACAACTTTGAATACTTGGACTTCTGGAATTTCTTGTCAGAGGATGATAACATAGTTGGTGTGGTTTCCTTGCCTATGTTGTTGTTGCTTTTGTGTTTGAGTTTTTGTGCAAGAGAAGAACAACACAACACTGACATGGAACAGCTCTTGGTTCACCCTGGAGAAGAAGAAGAAGAAGATGATGATGATGAAGATGGAGAGAACTTCACAACTGCAGGCATTTGGAGCCAACTCACATTTCGATGGCTGAATCCCATTTTTAGAAAGGGTCGAGTTCAGAAGCTTGAGCTTGCTCACATTCCTGATGTTCCTCATTCTGAAACTGCAGAAAATGCTTCTTCCTTATTGGAAGAATCGCTTCGCAAACAGAAACTTGAAGGGGCTTCCTTGGCTAAAGCTATAACCAGTTCTGTGTGGAAGTCCTTGGCTTTAAATGCAGTTTTTGCCGGGGTTAATACAATTGCATCTTATATGGGTCCATTGTTGATTACATACTTTGTCAATTTCTTGGTGGATGATAATTCCAATTCAAGCATCCAATGCGGCCTCATTCTTGCATTCATATTCTTCCTCTCAAAGACATTGGAGTCACTGAGCCAAAGACAATGGTACTTTGGTGCTCAGAGAATTGGAATTCGAGTGCGCGCGGCTCTTATGACTCTAATTTACAGCAAGTCTTTAATGATCAAGTGTGCAGGGCCAACCCATGGAAAAATCATAAACTTGGTGAATGTGGATGTTGAAAGAATTGGGGATTTCTGCTGGTACATTCATGGAGTTTGGTTGCTTCCAGTTCAGGTTATTTTGGCCTTAGTGATATTGTACATAAACTTGGGATTCTTGCCTTCAATTTCTGCACTTGCTGTCACCATTTTGGTTATGGTGTGTAACACACCTTTGGCCAATATGCAAGAAAAGTTACACTCCAAGATCATGGAAGCTAAGGATACAAGAATCAAGATGACTTCAGAGACAATGAAGAACATAAGGATACTGAAATTGCATTCATGGGAATCTACATTCTTACAGAAACTCCTCCAATTGAGAGACACTGAGAAGAGTTGGCTGCAGAAGTACCTCTACACTTGCTCAGCAGTAGCAACTCTTTTCTGGACTTCTCCAACTTTGGTTTCTGTTGTTACTTTCGGCATCTGCATACTGGTGAACACAGAACTGACTGCGGCTACTGTCCTCTCGGCCTTGGCAACTTTTCGGATTCTGCAGGAACCAATCTACAATCTTCCTGAGCTGATTTCCATGATAGCTCAAACAAAAGTCTCTCTTGATCGAATCCAAGAGTTGATCAATGAAGAGGATCAGAACCAGTTTATGAACAAGCACTCTTCGAAAGATTCATCAATTGTTATTGAAATCAAGCCAAGTGAATATGCATGGGAAACAAGTGATGGAACCAACAAGAAACCAACAATTCAAATCACAGAAAACTTGAAGATAAAGAAAGGTCAGAAGGTAGCAGTTTGTGGTTCAGTGGGGTCTGGAAAATCAAGCTTACTTTGTTGTATGCTTGGTGAGATTCCATTGGTTTCCGGGACTTTGATCAAAGTCTATGGAACAAGAAGTTATGTGCCACAGAGTCCCTGGATTCAATCAGGAACAGTAAGAGAAAATATCCTGTTTGGAAAGGAAATGAACAAGGACTTCTATGAAAGTGTTTTGGATGGCTGTGCTTTGCATCAAGATATCAACATGTGGGGTGATGGAGATTTGAATATTGTGGAGGAGAGGGGCATAAACTTAAGTGGAGGCCAGAAACAACGGATTCAACTCGCAAGAGCTGTTTACAATGATTCAGATATTTACTTCCTTGATGATCCTTTCAGTGCAGTTGATGCTCATACTGGAACTCATTTATTTAAAAAATGCCTTATGCAACTTTTGTCTGAGAAGACAGTTGTTTATGCTACTCATCAACTAGAATTTTTGGAAGCTGCAGATTTAATTCTGGTAATGAAAGATGGAAAAATAGTGGAGTCAGGAAGGTATAAAGAACTCATAGCATGTCCCAACTGTGAATTTGTTCGACAAATGGCTGCTCATGAAAAAACAATAAACCAAATAAATCCATGGCATGAAGAGAACTCTATTAGCTGCAGGCCCCTTCAAAAGAATCAAATTGAAGTTGCTGAAGAGAATCTTCAAGAAAGCATAAGCAATTGGAAGAGAAACAAAGAAGAAGAAGCAGAGACCGGTCGAGTGAAATGGAGTGTTTACTCAACCTTTGTCACATCTGCATATAGAGGATCACTTGTTCCGGTCATTCTTCTCTGCCAGATTCTGTTTCAAGTGATGCAAATGGGAAGCAATTATTGGATTTCTTGGGCTGCAGAACAAACTGGGAGGGTAACCAAAGGGATGCTTATGGGAACATTTGTTCTTCTTTCTGGTGGAAGCTCTATCTTTATACTTGGAAGGACTGTTTTGATGGCAGTGGTGGCTGTTGAGACAGCTCAGCGTCTTTTTCATGGAATGATTACATCTGTTTTCAGAGCACCTGTTTCATTTTTTGATACCACACCTTCAAGCAGAATCCTCAGTAGGTCATCAACAGATCAAAGTACAATTGACACAGACATACCATACAGATTAGCAGGGCTAGTGTTTGCACTAATTCAGTTGTTGAGTATTATCATGCTAATGTCGCAGGTCGCGTGGCAAGTCATCCTTGTGTTTCTTGTGGTGTTTGCTATCTCCATATGGTATCAGGCTTATTACATTACTACTGCCAGGGAATTAGCCAGGATGGTAGGGATCAGAAAGGCCCCAATCTTGCATCATTTCTCAGAATCTATTGCTGGGGCCGCCACGATTCGTTGTTTCAATCAAGAACAAATATTCATGACCAAAATCAAGGATCTTGTTGATGAATACTCTAGAGTAGCCTTTCATAATTATGCCACCATGGAATGGTTGTCAGTCCGGATCAATTTTCTCTTCAATCTAGTCTTCTACTTTGTTCTCATCATCTTGGTTACTCTGCCAAGGTCTGCCATTGATCCCAGCTTGGCAGGTCTGGTAGCTACTTATGGTTTGAACTTGAATGTACTTCAGGCTTGGGTCATATGGAACCTTTGCAATGTTGAGAACAAGATGATATCTGTTGAGAGAATATTGCAATTCTCTAGCATACCAAGTGAAGCACCACTGATAATCCAAGATTGTAGGCCTGAACCAGAGTGGCCTATGGAAGGGAAAATTGAGCTTCAGAATATTCATATTCAGTATGATCCGGCTGGTCCTATGGTTCTCAAAGGTGTCACTTGCACATTCCCGGGGCGAAAGAAGATCGGAGTAGTAGGGAGGACAGGGAGTGGAAAATCAACTCTGGTGCAAGCCCTTTTTCGAGTGGTGGAGCCTTTGGAAGGAAAGATACTAATAGATGGAGTACATATTTCCAAGATTGGTCTGCAGGATTTAAGATCTAAGCTTGGTATAATTCCTCAAGACCCAACCTTGTTTCTAGGCACTGTTAGGACTAACTTGGATCCTCTAGAACAACATGCGGATAAAGAACTCTGGGAGGTTCTCAAGAAGTGCCATCTTGCTGAAATTGTAAGGCAGGATCCAAGACTTCTTGATGCACCAGTGGCTGAGAATGGAGAAAATTGGAGCGTTGGACAAAGGCAACTCGTTTGTCTTGCTAGGCTGCTATTGAAGAAGAGAAGGATTTTGGTTCTAGATGAGGCAACAGCATCTATTGACACTGCAACTGACAATTTAATTCAAAAGACTATTAGAGAAGAAACTAGTGAATGCACAGTGATTACTGTAGCACATAGAATCCCTACAGTTATTGATAATGACTTGGTTTTGGTCCTTGATGAAGGGACAATTGCAGAGTATGATGAACCAGATCAGTTGCTGCAGAACAATACTTCATCTTTCTCAAAGTTGGTTTCAGAATTTTTGAGGAGATCATCCCCCAAGTAG 4398 0.4077 MFTLLLSLNFPVFPSTSTMAIVDTLLVTANVAFFYAILIWLLLHTLRQSKLQRAVFLQQGPKFFSIITLLFNFILTLLTIAFAVHEYRTNKIVRYSSVTFALTWVMASLVSFYSMKKTTRDNKRFPFVLVLWWVWASIIEAISVSIGLMKNNFEYLDFWNFLSEDDNIVGVVSLPMLLLLLCLSFCAREEQHNTDMEQLLVHPGEEEEEDDDDEDGENFTTAGIWSQLTFRWLNPIFRKGRVQKLELAHIPDVPHSETAENASSLLEESLRKQKLEGASLAKAITSSVWKSLALNAVFAGVNTIASYMGPLLITYFVNFLVDDNSNSSIQCGLILAFIFFLSKTLESLSQRQWYFGAQRIGIRVRAALMTLIYSKSLMIKCAGPTHGKIINLVNVDVERIGDFCWYIHGVWLLPVQVILALVILYINLGFLPSISALAVTILVMVCNTPLANMQEKLHSKIMEAKDTRIKMTSETMKNIRILKLHSWESTFLQKLLQLRDTEKSWLQKYLYTCSAVATLFWTSPTLVSVVTFGICILVNTELTAATVLSALATFRILQEPIYNLPELISMIAQTKVSLDRIQELINEEDQNQFMNKHSSKDSSIVIEIKPSEYAWETSDGTNKKPTIQITENLKIKKGQKVAVCGSVGSGKSSLLCCMLGEIPLVSGTLIKVYGTRSYVPQSPWIQSGTVRENILFGKEMNKDFYESVLDGCALHQDINMWGDGDLNIVEERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGTHLFKKCLMQLLSEKTVVYATHQLEFLEAADLILVMKDGKIVESGRYKELIACPNCEFVRQMAAHEKTINQINPWHEENSISCRPLQKNQIEVAEENLQESISNWKRNKEEEAETGRVKWSVYSTFVTSAYRGSLVPVILLCQILFQVMQMGSNYWISWAAEQTGRVTKGMLMGTFVLLSGGSSIFILGRTVLMAVVAVETAQRLFHGMITSVFRAPVSFFDTTPSSRILSRSSTDQSTIDTDIPYRLAGLVFALIQLLSIIMLMSQVAWQVILVFLVVFAISIWYQAYYITTARELARMVGIRKAPILHHFSESIAGAATIRCFNQEQIFMTKIKDLVDEYSRVAFHNYATMEWLSVRINFLFNLVFYFVLIILVTLPRSAIDPSLAGLVATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSSIPSEAPLIIQDCRPEPEWPMEGKIELQNIHIQYDPAGPMVLKGVTCTFPGRKKIGVVGRTGSGKSTLVQALFRVVEPLEGKILIDGVHISKIGLQDLRSKLGIIPQDPTLFLGTVRTNLDPLEQHADKELWEVLKKCHLAEIVRQDPRLLDAPVAENGENWSVGQRQLVCLARLLLKKRRILVLDEATASIDTATDNLIQKTIREETSECTVITVAHRIPTVIDNDLVLVLDEGTIAEYDEPDQLLQNNTSSFSKLVSEFLRRSSPK* 1466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4168 1465 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 909 1185 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy3g4168 1465 Gene3D - 1205 1458 IPR027417 -
Ahy3g4168 1465 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 293 573 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy3g4168 1465 SUPERFAMILY ABC transporter transmembrane region 909 1202 IPR036640 GO:0005524|GO:0016021
Ahy3g4168 1465 CDD ABCC_MRP_domain1 606 811 - -
Ahy3g4168 1465 CDD ABC_6TM_ABCC_D2 907 1197 IPR044726 GO:0140359
Ahy3g4168 1465 ProSitePatterns ABC transporters family signature. 736 750 IPR017871 GO:0005524
Ahy3g4168 1465 Pfam ABC transporter transmembrane region 294 560 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy3g4168 1465 Pfam ABC transporter transmembrane region 911 1149 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy3g4168 1465 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1222 1456 IPR003439 GO:0005524
Ahy3g4168 1465 SMART AAA_5 1248 1439 IPR003593 -
Ahy3g4168 1465 SMART AAA_5 637 811 IPR003593 -
Ahy3g4168 1465 Coils Coil 859 886 - -
Ahy3g4168 1465 Pfam ABC transporter 1239 1387 IPR003439 GO:0005524
Ahy3g4168 1465 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 608 834 IPR003439 GO:0005524
Ahy3g4168 1465 Gene3D ABC transporter type 1, transmembrane domain 871 1203 IPR036640 GO:0005524|GO:0016021
Ahy3g4168 1465 Gene3D ABC transporter type 1, transmembrane domain 267 591 IPR036640 GO:0005524|GO:0016021
Ahy3g4168 1465 PANTHER OS01G0902100 PROTEIN 126 1463 - -
Ahy3g4168 1465 CDD ABC_6TM_ABCC_D1 294 581 IPR044746 GO:0140359
Ahy3g4168 1465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 631 824 IPR027417 -
Ahy3g4168 1465 Pfam ABC transporter 632 763 IPR003439 GO:0005524
Ahy3g4168 1465 SUPERFAMILY ABC transporter transmembrane region 287 588 IPR036640 GO:0005524|GO:0016021
Ahy3g4168 1465 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 126 1463 - -
Ahy3g4168 1465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1214 1448 IPR027417 -
Ahy3g4168 1465 CDD ABCC_MRP_domain2 1220 1440 - -
Ahy3g4168 1465 Gene3D - 629 858 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4168 Ahy-Chr3 141633794 141640026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4168 605 860 Calmodulin-binding Proteins AT2G36910 28.369 1.71e-21 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4450 13 144626336 144632270 Ahy3g4168 3 141633794 141640026 hybridization