Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4162 ATGGAGTTAATATACAAAGAAACGGTGAAACCAAGTTCACCCACGCCTCCTCATCTCAAAACTTATCCCCTCTCCTTCATGGACGTTAAAACAACTCCCAATTACGTCCCTCTACTCTACTTTTACCGTTCCAACCACCAGCTTCTAGAATCTACCGTAGCCTTGCTCAAGAAATCGTTATCTGAAGCTCTCTCACTGTACTACCCAATTGCAGGCAGGTTCAGAGATCAAGTCGCCATTCACTGCAACGACCAGGGAGTCCCACTGCTCATCGCAACAATCAAAACGAATCTCTCTCACATTCTCAACAACCCAACCCATGCAAATCTTCTCCCTCTCTTCCCTCAGAATCTGCCATGGAGCGCTATGCAAAATCCAAGAGATGACGCCATACTCGCCATTCAAATCAACTTCTTCTCCTGCGGCGGAATCGCAATAGCCCTCTGCATGTCTCACAAGTTCAGCGACATCTCCGCTCTCTTCAACTTCGTCAACGACTGGGCTTCCATCACCAAGAATCAGAATCACTCACTGCTTCCCTCTCCGCCCTTGCTCCACGCCGGAGTTTCTCTTTTCCCTCAAGGAGATTTTCCGGTTTACCCGGAACCACCGTACCCTGAGATCCATAACTCGGTGTGCAAGAGGTTTGTGTTCCAAGGTTCCAAGATCGATTCCCTGAAAGCCATGGCTGCACCGGTTCACGCTACAAGGATTCAAGTGGTGACTGCACTGATATGCAAGTGTGCGATTTCTGCGCTAGGGTTAAGCCCTAACACCCAGTTGTTAAGCTCCGTTGCCGTCAATCTCCGAAACAGAATCGATCCTCCCATTCCAAACAAGACCATAGGGAACATGATTTCGTTCTTCGTGTTTAGTTCCTCTCAGACGGATCAGCTGCCAGAGTTGGTAAGCAAGATGAAGCAAGGGATGGAAGGTAGTGAGGCGCAGATGAAGAAGTATGGAGGGAAGGGTAGGGACTTGGACTTCATTGCTGAGTTCGTGAAAGGAGACGCGGGAGAGGTTCCGGAGGCGGAGGATTTGAAGATTCCGGTGATGATAATGTCAAGCTGGTGTAGGTTTTCAATGTACGAAGCCGATTTTGGATGGGGGAAACCGGTGTGGATAGCATCTGTGAGTAATGTCCCGAACTTGGTGGTTTTTATGGATGCGAGAGATGGGAAAGGAATGGAAGTGATTGTGACCATGGAAGAGCAGCACATGGCCAGGTTCGAGTGTGATCACCACCTGCTTCAATACGCCTCCGTTGATCCGCCTGTTCAATTCCAACAAAATGATTTTTGA 1302 0.4877 MELIYKETVKPSSPTPPHLKTYPLSFMDVKTTPNYVPLLYFYRSNHQLLESTVALLKKSLSEALSLYYPIAGRFRDQVAIHCNDQGVPLLIATIKTNLSHILNNPTHANLLPLFPQNLPWSAMQNPRDDAILAIQINFFSCGGIAIALCMSHKFSDISALFNFVNDWASITKNQNHSLLPSPPLLHAGVSLFPQGDFPVYPEPPYPEIHNSVCKRFVFQGSKIDSLKAMAAPVHATRIQVVTALICKCAISALGLSPNTQLLSSVAVNLRNRIDPPIPNKTIGNMISFFVFSSSQTDQLPELVSKMKQGMEGSEAQMKKYGGKGRDLDFIAEFVKGDAGEVPEAEDLKIPVMIMSSWCRFSMYEADFGWGKPVWIASVSNVPNLVVFMDARDGKGMEVIVTMEEQHMARFECDHHLLQYASVDPPVQFQQNDF* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4162 433 PANTHER F21J9.9 3 426 - -
Ahy3g4162 433 Pfam Transferase family 2 414 - -
Ahy3g4162 433 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 3 426 - -
Ahy3g4162 433 Gene3D - 1 198 IPR023213 -
Ahy3g4162 433 Gene3D - 209 420 IPR023213 -
Ahy3g4162 433 SUPERFAMILY CoA-dependent acyltransferases 200 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4162 Ahy-Chr3 141538303 141539604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4162 9 411 Monolignol Biosynthesis Gene Families AT5G48930 24.194 2.86e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4162 - - adu:107481923 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4442 13 144502827 144504232 Ahy3g4162 3 141538303 141539604 hybridization