Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4138 ATGGAGGAGGAGGATGAGATCCAACCACAGGCGTGTAAGTTCCCCAGGCTCGCTAATGGCAGGACCGACCCCACCAACAACGCCAAGATAGGAGCAGCCTGGCACCATTCCTCCAGGATCATAAGGGTTTCTAGAGCTTCCGGCGGCAAAGATCGCCATAGCAAGGTAATGACCTCTAAGGGCCTCAGAGACAGAAGGGTCAGGCTCTCCGTCACCACCGCCATTCAGTTTTACGACCTCCAAGACCGATTGGGCTATGACCAGCCCAGCAAGGCCGTGGAGTGGCTCATCAAGTCTGCTCAAGACGCCATTGCCGAGCTTCCATCCTTGAACACCACCTTCCCTGAAACCCCGAAGCAACCGAGCGACGAGAAGAGGGGCGGTGCAGGCGCCGACGATGCGGACATAGAGATAGAGGAGCAGCAGAAGCAGAAGCAGAACAGCCAGAATATGTCACTTTCGAAGTCGGCTTGCAGCAGCACCTCAGAGACGAGCAAGGGGTCCGGGTTGTCCCTGTCTCGGTCGGATATCCGCGTGAAAGCGAGGGAGAGGGCAAGGGAGAGAGCGGCCAAGGAGAAGAAGAAAGACAAGTGCAACAACAATAACAATAATCAGCATCAGAATAGCCTTGTTCATCATCAGCAACATCAGCAGCAGCAGCATCACAACATGAACCCAATTTCTCCTTCGTTTACTGAGCTACTCACAGGTGGCATCACCACTGCGGTTCCAACAACAACTAGTCCTACTTCTGATGAGCCTGCTGCTGCTCTCTTCCACAAAGCGGCAAGGCAACAACAACAGCAGCAGCAGCAGCAGCAATGGGGCTCAGCACCCATGGATTACTTCAACCAGGTTCTCGTAGGCCCCTCTTCATCTTCAAGAACCCACCAACACCAACACCAGATCCATACCCTAGCTGAGGCCATATCCTTTAATAATGATCAGCAGCAGCAGCAGCAGCAGCACCACTACTCCTTCATCCCTGATCAGTTCATGCCAGCTGTGGTTACATCCTCTCACTCCCATAACCATCATCACAGTGCTGGCGACACTGATTACAACCTCAACTTCACGATTTCTCCGGCTTCTGTATCTGCTGCTTCTGCCTCTGGCCTTGCTGCTTACAACAACAATAGGGGGACCCTTCAGTCCAATTCTCCGTCACATTTCTTGCCTCACCTCCAGAGGTTCTCGCTGCCTATGGACGGATCCACTGTTCCTTTCTTCATTGGAGCTGCCGCACCCACCGCTGCTCCGCCTCCTGCCATCGACAACCACCAACACCATCAGTTCTCATCACCCGCATTTGATGGCCGCTTGCACCTCTACTACGGCGATGGAACCCGCCATTCCGACCACAAGGGCAAATCCAAGAACTCATGA 1386 0.5382 MEEEDEIQPQACKFPRLANGRTDPTNNAKIGAAWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSAQDAIAELPSLNTTFPETPKQPSDEKRGGAGADDADIEIEEQQKQKQNSQNMSLSKSACSSTSETSKGSGLSLSRSDIRVKARERARERAAKEKKKDKCNNNNNNQHQNSLVHHQQHQQQQHHNMNPISPSFTELLTGGITTAVPTTTSPTSDEPAAALFHKAARQQQQQQQQQQWGSAPMDYFNQVLVGPSSSSRTHQHQHQIHTLAEAISFNNDQQQQQQQHHYSFIPDQFMPAVVTSSHSHNHHHSAGDTDYNLNFTISPASVSAASASGLAAYNNNRGTLQSNSPSHFLPHLQRFSLPMDGSTVPFFIGAAAPTAAPPPAIDNHQHHQFSSPAFDGRLHLYYGDGTRHSDHKGKSKNS* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4138 461 MobiDBLite consensus disorder prediction 201 232 - -
Ahy3g4138 461 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 460 IPR005333 GO:0003700
Ahy3g4138 461 ProSiteProfiles R domain profile. 175 193 IPR017888 -
Ahy3g4138 461 MobiDBLite consensus disorder prediction 143 172 - -
Ahy3g4138 461 MobiDBLite consensus disorder prediction 119 142 - -
Ahy3g4138 461 MobiDBLite consensus disorder prediction 109 232 - -
Ahy3g4138 461 Pfam TCP family transcription factor 48 195 IPR017887 -
Ahy3g4138 461 PANTHER TRANSCRIPTION FACTOR TCP24 1 460 - -
Ahy3g4138 461 MobiDBLite consensus disorder prediction 176 200 - -
Ahy3g4138 461 ProSiteProfiles TCP domain profile. 49 107 IPR017887 -
Ahy3g4138 461 Coils Coil 131 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4138 Ahy-Chr3 141164320 141170968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4138 34 460 TCP Transcription Factor Family AT4G18390 41.892 1.60e-72 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy3g4138 TCP 5.50E-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4138 - - lang:109362619 359.762