Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4132 ATGAGGAGGAACTGCAACTTAGAACTACGGCTTTTCCCTTCTCCTGCCTCCGACCACCGCTCCATGGAGGAAGAAGAAGCAGGAGGCAGTGAGAGTAGGAGTAGCCCTTTACAAGGACAACATACACCGCAATCACACCCACTCACCATATTCTACGATGGCAAGATTTCCGTTTGTGACGTCACTCATTCTCAGGCAAGATCCATCTTAATGCTTGCAAGAAAAGAATTGGAGGAAAGAGTGAGGACACCAACATCAACTGGGTCTTCAGTAGAGCCATGTTCACCAGCATTGCTTCAATCATCGTCACAGCAACAACAATATTATAATAATAATAATTTGCATAGCCCTGGGACTAGTCTTTCCATGAAAAGATCGCTGCAGAGGTTTCTCCAAAAGAGAAAGAACCGCCTTCAGGAAGCATCCCCCTACCATCACTAG 441 0.4603 MRRNCNLELRLFPSPASDHRSMEEEEAGGSESRSSPLQGQHTPQSHPLTIFYDGKISVCDVTHSQARSILMLARKELEERVRTPTSTGSSVEPCSPALLQSSSQQQQYYNNNNLHSPGTSLSMKRSLQRFLQKRKNRLQEASPYHH* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4132 146 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 146 IPR040390 -
Ahy3g4132 146 MobiDBLite consensus disorder prediction 78 120 - -
Ahy3g4132 146 SMART tify_2 41 75 IPR010399 -
Ahy3g4132 146 Pfam Jas motif 124 144 IPR018467 -
Ahy3g4132 146 PANTHER - 1 146 - -
Ahy3g4132 146 MobiDBLite consensus disorder prediction 1 48 - -
Ahy3g4132 146 MobiDBLite consensus disorder prediction 83 120 - -
Ahy3g4132 146 MobiDBLite consensus disorder prediction 31 47 - -
Ahy3g4132 146 ProSiteProfiles Tify domain profile. 41 75 IPR010399 -
Ahy3g4132 146 Pfam tify domain 43 73 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4132 Ahy-Chr3 141097614 141098431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4132 1 145 Tify Gene Family AT1G30135 39.333 3.30e-22 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Ahy3g4132 tify 5.50E-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4132 - - gmx:100781356 155.606