Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4076 ATGTCTGTGGCTGCTCCAAGTTCCCTTCTGAAGGTGGAGGAGATACAAGGAAGAGGGAGGGGAATGGTTGCATCACAACCTCTTAAAGCCGGCCAAATTGTCCTTAGAGATTCTCCTATCCTGCTCTATTCTGCTTTGCCATTGATCCCGCAGTCTTTATCTTCGTCCTCCTCTACCCTAGCCTCCTCCTTCTGTGATCACTGCTTTAGAACCTTACCATCCTCTTTACAGGGCGATTCTTCATCTTCTGCAGTTTTGTGCCCTTCATGTAGACATTATCGTTTTTGCAGCTCTAATTGTCTCTCAAAGGCATTGAATTCATCTCATTCTTCTTGGGTATGTCAAGCATTGTCTCACTTCCAAGCCAACTCTCCTCTTATTGGACATCCCCTTGAGCTTCAAGTCCAGGCTCAATTTCTCATTGCTTCGTACAATCTTGCCAATATCTCCCCCTCAGACTTTCAAATCTTGCTTTCTCTTCATGGTTCTCCTGATGACGCTACAATTTCTGCAGCTCAATTCCTACACCCTCTTATTTCATCCCTCTGCTCAATTGCTCCCATTGGTCTTCAGAATGTATTTTCTTTGGAACTCACCTCTGCGCTTCTGGCCAAGGACAAGTACAATGCCTTTGGCTTAATGCAGCCTGTTTCTGTTGATGATGGCCAGAGGTCTGTTAGAGCTTATGGTATATACCCCTATGCCTCCTTTTTTAACCACGATTGCCTTCCCAATGCCTGCAGATTTGATTATGTGGATAGTAATCCACCAGATGGCAGTAATAATACTGACATTATTGTTAGGATGATTCATGATGTTCCTCAAGGCAGGGAGATCTGTTTGAGCTATTTCCCTGTCAATGAAAACTATGCTAGCAGGCAGAAGAGATTGATGGAAGACTATGGCTTCACCTGTAATTGTGATCGGTGTAATGTCGAATCAAATTGGTCAGATAATGATGACACTATCGAAGAAGATAATGCAGAGGATGGAGAAGAGGTTATGGATGAGGAGGACCAATATGAAAACATGGCAGCGTCAGATACAGACAATAATAATGATTTCCCACATGCATATTTCTTTTTAAGGTACATGTGTGATAGACCAAATTGCGGGGGAACTTTGGCTCCTCTACCCCCACAAGTTGATAGTACATCTAATGTCATGGAATGTAATGTCTGTGGCAAATTGAAAAGTGATGATGAGCAAGATGAAGCTCCCATGGAGGACTGA 1233 0.4331 MSVAAPSSLLKVEEIQGRGRGMVASQPLKAGQIVLRDSPILLYSALPLIPQSLSSSSSTLASSFCDHCFRTLPSSLQGDSSSSAVLCPSCRHYRFCSSNCLSKALNSSHSSWVCQALSHFQANSPLIGHPLELQVQAQFLIASYNLANISPSDFQILLSLHGSPDDATISAAQFLHPLISSLCSIAPIGLQNVFSLELTSALLAKDKYNAFGLMQPVSVDDGQRSVRAYGIYPYASFFNHDCLPNACRFDYVDSNPPDGSNNTDIIVRMIHDVPQGREICLSYFPVNENYASRQKRLMEDYGFTCNCDRCNVESNWSDNDDTIEEDNAEDGEEVMDEEDQYENMAASDTDNNNDFPHAYFFLRYMCDRPNCGGTLAPLPPQVDSTSNVMECNVCGKLKSDDEQDEAPMED* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4076 410 Gene3D SET domain 21 310 IPR046341 -
Ahy3g4076 410 SUPERFAMILY SET domain 8 305 IPR046341 -
Ahy3g4076 410 SMART set_7 8 290 IPR001214 GO:0005515
Ahy3g4076 410 ProSiteProfiles SET domain profile. 8 284 IPR001214 GO:0005515
Ahy3g4076 410 Gene3D - 124 210 - -
Ahy3g4076 410 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 2 405 IPR044238 -
Ahy3g4076 410 Pfam SET domain 19 283 IPR001214 GO:0005515
Ahy3g4076 410 Gene3D - 64 123 - -
Ahy3g4076 410 CDD SET_SMYD 209 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4076 Ahy-Chr3 140200171 140203661 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy3g4076 SET 4.70E-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4076 - - gmx:100783406 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4353 13 143196149 143199545 Ahy3g4076 3 140200171 140203661 hybridization