Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4056 ATGAGTTGTTCAGTAGCAGCAGCATACTCATCAGTTGGAACATGTACATGGATGCGGCTTTACCCCCAAAAGAGAACCCCAACCACTCTTGCAATCTCCTCCACTCATCACAAATGTTCACACAAGCAACAACAACTAGAACTAGTAGTCACTCCTCCCCTCTTGAAGAGAAGAGATGCAATAGGCCTTGGGCTTGGGCTTGGGCTTCTCCATTCCTTCTTGCAGCCACAGTTCTCATCAGCAGCTGAATCAGCACCATGTGAATTAACAGTAGCTCCTTCTGGCCTTGCCTTCTGTGACAAACTTGTTGGAACTGGCCCTCAGGCCGTTAAAGGCCAGCTTATTAAGGCACACTATGTTGGGAGACTGGAGAATGGCAAAGTTTTCGACAGCAGCTACAATCGCGGCAAGCCACTTACATTCCGCGTCGGCGTTGGAGAGGTCATCAAAGGATGGGATGAAGGCATTTTAGGAGGTGATGGAATTCCTCCAATGCTTCAAGGAGGGAAACGTACGTTGAAGCTTCCACCAGAACTCGGATATGGTTCAAGAGGAGCGGGTTGTAGAGGAGGTTCATGTGTCATTCCACCTGATTCAATACTCTTTTTTGATGTGGAATTTGTTAGCAAAGCATGA 636 0.4764 MSCSVAAAYSSVGTCTWMRLYPQKRTPTTLAISSTHHKCSHKQQQLELVVTPPLLKRRDAIGLGLGLGLLHSFLQPQFSSAAESAPCELTVAPSGLAFCDKLVGTGPQAVKGQLIKAHYVGRLENGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGIPPMLQGGKRTLKLPPELGYGSRGAGCRGGSCVIPPDSILFFDVEFVSKA* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4056 211 SUPERFAMILY FKBP-like 89 209 - -
Ahy3g4056 211 Gene3D - 83 211 IPR046357 GO:0003755
Ahy3g4056 211 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP13, CHLOROPLASTIC 24 210 - -
Ahy3g4056 211 PANTHER - 24 210 IPR044609 GO:0000413|GO:0003755|GO:0061077
Ahy3g4056 211 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 107 207 IPR001179 GO:0003755
Ahy3g4056 211 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 112 211 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4056 Ahy-Chr3 139996879 140000037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4056 79 209 Calmodulin-binding Proteins AT5G48570 36.879 3.76e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4056 K01802 - vvi:100262788 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4333 13 143008883 143011901 Ahy3g4056 3 139996879 140000037 hybridization