Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4051 ATGGGAGAGCTTCTTGCAAGTTACAACATCATAGGTGCAGATCAAGTAGTGTCCCCTCTGCAATTATCATCAGTGTTATCTTCTCTGGCTATCAGTGGTAGCATTACTACTCCTACTCCTACTCGTACTCCTACTCCTACTCCTACCCCAGCAGCTGCAATACCATGTTTGATTGATCCTCAGATTGAAGCTTCTCTCTGCCAACGCTTCCATTCACTCTGCCGCCAAAACACTACTCTTATTCCTCCTCAAGGATCTCAAAGTAGCAATAGTATTATTCGTCCTTTTAATGGCGATCGTGATCATCAAGATATGATGCCTGCTCAATCTGCTGCTGCTACTCCGACTGCCGTCGCTGCTTCTGAAACCCAAATTGGTACGCCGGCTGCGGCGGTAGTGAGCTTCTTCACAGAGGAGGAGATAGTAAGAATGAAAGAGGCGGCGATTAAAGCCGTGGACGAAGTAGCGAGGCTTCTGCGGATGAACGAGCCTTTCTGGTTTAGGTCAACGGTTGATGGAAACTTCATTCTTCAGCGTCAAAGCTACGACGGCGTTTTCCACAATGTTGGGTTGAAGTGTGAAGCACGCAGAGAGGCATCAAAAGATTCACGAGTGGTGGCTATGAGCGGCAGGAAATTGGTTGATATGTTCTTAGATTCGGAAAAATGGGTTTCCCTTTTCCCAACAATGGTTAAAAAAGCAGACACAATCGAAGTACTCAACACCGGTTTGCCACAGACCCGAAGTGGAGCCTTGCAACTGATGTATGCAGATATACATATTCTTTCACCGTTACTTAGATCTCGGGAATTCTTTTTCCTGCGGTACTGTGTGCAAGTTGATGTAGGTGCATGGATCATAGCAGATGTCTCATTTGATTCCTCCAGATTCCTTCATTCCCTCACTTGGAAGCTTCCCTCTGGATGCTTAATCCACGACATGAACGATGGATATTCCACCATTACTTGGGTGGAACATGTGGAAATAAGTGACAGTATCCAAACGAATCCGATTTTTAGAGACCTAGTTTGTAGCAACAGTGCATTTGGAGCAGAAAGATGGATTTTGACACTCGAAAGGATGTGCGAGAGAATTGCATTCGCCTCAATGAACATGATGCCTAGTTGTGACAGTGGAGTGATTGCTTCACCTGAAGGACGAAAGAATGTGATGGAATTTTCTGAGAGGATGGTAAAGCTCTTTTGTGGGTCTCTGGACATGACAGGTAACATGGAGTTGCAATATGGGAAGAACAACAATGGTGTAAGAGTTGGTATTCGAAGAAGTATAGAGGCGGGTGTGCCTAAGGGCTTGATTGTCACTGCATCTACCTCCCTTTGGCTTCCTCTCTTGCCCCAAACACTCTTTAACTTTTTCAAAGATCCATCAACTAGACATCAGTGGGATGTTTTGTGCCATGGAAATCCAGTGACTCAGATTCAGCGCATCTCAAATGGAACTTTTTCTGATAACTTTACAACAATTCTTCGGCCTTATATCCCGACGGAGAACAACACGCTTCTTCTCCAAGAATGCTGCACGGATTTCTTGGGAAGCGTGGTGGTGTATGCTCCGGTTGATGTTGGAACAATAACTGCGGCAATCAACGGAGAGGACACCACCACGATGCCTATTCTCCCCTCCGGCTTCACCATATGCGGAGATGGATCTCCTCCGCGAGGAGCTTTCTTTGGCTGTGCGCTCCCTGAATCGAGACATTACGGTGGCTCCATACTAACGGTGACCGTACAGGTGCTAGTTAGCAACCAAAATGCGGTGGGGCAGTTCAACATGAACACCGTTGATGCTGTCAATGGACTCGCAGCCACCACTGTCAAGAAAATTAAAGCCGCCTTCAAGTGTCCCTGA 1869 0.465 MGELLASYNIIGADQVVSPLQLSSVLSSLAISGSITTPTPTRTPTPTPTPAAAIPCLIDPQIEASLCQRFHSLCRQNTTLIPPQGSQSSNSIIRPFNGDRDHQDMMPAQSAAATPTAVAASETQIGTPAAAVVSFFTEEEIVRMKEAAIKAVDEVARLLRMNEPFWFRSTVDGNFILQRQSYDGVFHNVGLKCEARREASKDSRVVAMSGRKLVDMFLDSEKWVSLFPTMVKKADTIEVLNTGLPQTRSGALQLMYADIHILSPLLRSREFFFLRYCVQVDVGAWIIADVSFDSSRFLHSLTWKLPSGCLIHDMNDGYSTITWVEHVEISDSIQTNPIFRDLVCSNSAFGAERWILTLERMCERIAFASMNMMPSCDSGVIASPEGRKNVMEFSERMVKLFCGSLDMTGNMELQYGKNNNGVRVGIRRSIEAGVPKGLIVTASTSLWLPLLPQTLFNFFKDPSTRHQWDVLCHGNPVTQIQRISNGTFSDNFTTILRPYIPTENNTLLLQECCTDFLGSVVVYAPVDVGTITAAINGEDTTTMPILPSGFTICGDGSPPRGAFFGCALPESRHYGGSILTVTVQVLVSNQNAVGQFNMNTVDAVNGLAATTVKKIKAAFKCP* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4051 622 SUPERFAMILY Bet v1-like 138 365 - -
Ahy3g4051 622 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 139 620 - -
Ahy3g4051 622 SMART START_1 146 364 IPR002913 GO:0008289
Ahy3g4051 622 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 139 620 IPR042160 -
Ahy3g4051 622 SUPERFAMILY Bet v1-like 391 589 - -
Ahy3g4051 622 ProSiteProfiles START domain profile. 137 367 IPR002913 GO:0008289
Ahy3g4051 622 CDD START_ArGLABRA2_like 142 363 - -
Ahy3g4051 622 Pfam START domain 148 364 IPR002913 GO:0008289
Ahy3g4051 622 Gene3D - 148 343 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4051 Ahy-Chr3 139870069 139878782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4051 104 622 Homeobox Transcription Factor Family AT1G73360 40.076 2.12e-122 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4051 K09338 - qsu:111982963 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4323 13 142828267 142835487 Ahy3g4051 3 139870069 139878782 hybridization