Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4050 ATGGCTTCTCCAATGGGGTCATCATCAACGGCTGGTGGTGCTACTGATGGTACTGATGATGAGGGGCAAGATCGTCCTCAAAATTCTCGAAGGTTTTACCATCGTCACACTCCCCATCAGATAGCAAAGCTTGAGGAAGCGTTCAACGCATGTGCACATCCAAGTGATAGCATGCGGCGACAACTAGGCACAGAACTAGGGCTTGAACCCAGACAAGTCAAATTTTGGTTTCAGAATAGGAGGACCCAAGCAAAGGCTCAAGCTGATAGATCAAATAACTGTGCTCTTCGGCGAGAGAATGAGAGAATGATGGCAGAAAACTTGATGTTCAGAGAGTCCTTGAAGAGTGTAGTTTGCATAACTTGTGGTGGTCCAACCATAAGGGACGATGATTGCCACATTCGCTTGGAACAATTCAAGTTGGAAAATGATTTTCTCGTACAAGAGGCTAGTACTTCTAATCAGTTAGATAGTTTAACGTATTTGACTAAAGTATAG 498 0.4418 MASPMGSSSTAGGATDGTDDEGQDRPQNSRRFYHRHTPHQIAKLEEAFNACAHPSDSMRRQLGTELGLEPRQVKFWFQNRRTQAKAQADRSNNCALRRENERMMAENLMFRESLKSVVCITCGGPTIRDDDCHIRLEQFKLENDFLVQEASTSNQLDSLTYLTKV* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4050 165 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 19 149 IPR042160 -
Ahy3g4050 165 MobiDBLite consensus disorder prediction 1 30 - -
Ahy3g4050 165 ProSiteProfiles 'Homeobox' domain profile. 27 87 IPR001356 GO:0003677
Ahy3g4050 165 Gene3D - 16 106 - -
Ahy3g4050 165 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 19 149 - -
Ahy3g4050 165 SMART HOX_1 29 91 IPR001356 GO:0003677
Ahy3g4050 165 MobiDBLite consensus disorder prediction 1 16 - -
Ahy3g4050 165 SUPERFAMILY Homeodomain-like 10 86 IPR009057 -
Ahy3g4050 165 CDD homeodomain 30 87 IPR001356 GO:0003677
Ahy3g4050 165 Pfam Homeodomain 30 85 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4050 Ahy-Chr3 139867765 139870069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4050 14 145 Homeobox Transcription Factor Family AT3G61150 45.588 2.52e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Ahy3g4050 Homeodomain 4.10E-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4050 K09338 - ahf:112783833 315.079