Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4049 ATGTGTGTCAACTACTGCAGACAAAAACCAATGAGTTGTGGAGACAGGCCAAATATGCATGAGCAACCTGGTTGCTTTGATCCCAACACAATGGCAGAAGGTGTCAGTACTCCAAAACTAAAAGATACCTTTCCTCAAACTCTCTCAGACCCATCATCATCACCATCACCACTTATTGTTGTAGGCAACACTACAAACAGCAACAATAACCTTGAAGAGAATATCAGACTTTCTATGGAGGAGTTATCCTATCACCACCAGCAAGAAGATGTCTCCAACTATGTAAATGGAGTCACTGCCACAACCATAGATATCCCACATCCACAGCATCTTGGTTTGAATATGGGTAACTCCTACAACAACAATATCAACATGGATTCCCATTTGGTTCAGCATGAAATTGATATCCTTCCCTATCAGCAACCCACTTGGGATCCCAATGTTCAGGAAATGCAAGATATGGGTTATACTAATCACTCAGAACACCAACCACATGATCAGCAATTTCAGCAAACTGAGGCACAGAACTGCAGCCAAAGTTACAATCCCTCCTCCATTTTGGACCCGCCTTACCCTTCACAAGATCTCCTAAACCTTCTTCACTTGCCAAGATGTTCAACTTCGTCTTTGCTTGCCAACCCTGCTATCTGCATCGCAAACAAGACACAGAATTTTCAGAATCCGATGGGATTTCTTGGGGACCTTCCAATAGGATCAGACAACACAAGTGCATCCTCAGTATTGTATGATCCTCTACTCCATTTGAACCTGCCTCCACAGCCTCCAGCCCTCAGAGAGCTGTTTCAGTCTCTTCCCCGTGGCTACAGCTTGCCAACGAACTCAAGAAGTGGTTCTCTTTTCGGTGGAGGGGATGAGATTGAAGGAGATGGAAGCCAACTTGACATGGGAGTGCTCGACTTCAACAGGGTCACAGCTTCAGTGGGCAAAGGAAGGGAAGGAAAAGGCACCAAACACTTTGCAACTGAGAAACAAAGAAGAGAGCAACTGAATGGCAAATACAAAATCCTGAGGAGTCTTATCCCAAGCCCCACAAAGATGGATAGAGCCTCTGTGGTGGGTGATGCCATTGAATATATAAGGGAGCTTCTCAGAACGGTCAATGAGCTCAAATTATTGGTGGAGAAGAAAAGATATGGAAGGGAGAGATGCAAAAGGCAGAAAGCGGAAGATGATGCTGCAGAGAGCTGCAATATAAAGCCTTTCAGTGATCCAGATGGATGCATAAGGACCTCATGGCTTCAAAGGAAATCAAAAGATAGCGAGGTTGATGTGCGAATTGTTGATGATGATGTTACAATCAAACTCTTCCAGAGGAAGAAGATTAACTGTCTGCTTTCAGTCGCCAAGGTTCTGGATGAACTTCAGTTGGAACTTCACCATGTTGCAGGTGGACATGTTGGCGAATATTGCAGTTTCTTGTTCAATAGCAAGATAATAGAAGGTTCTTCAGTCTATGCCAGTGCTATAGCCAACAGGGTGATCGATGTTATGGACACTCAGTATGCAGCAGCAGTTCCACATACAAGTAGCTATTAG 1557 0.4425 MCVNYCRQKPMSCGDRPNMHEQPGCFDPNTMAEGVSTPKLKDTFPQTLSDPSSSPSPLIVVGNTTNSNNNLEENIRLSMEELSYHHQQEDVSNYVNGVTATTIDIPHPQHLGLNMGNSYNNNINMDSHLVQHEIDILPYQQPTWDPNVQEMQDMGYTNHSEHQPHDQQFQQTEAQNCSQSYNPSSILDPPYPSQDLLNLLHLPRCSTSSLLANPAICIANKTQNFQNPMGFLGDLPIGSDNTSASSVLYDPLLHLNLPPQPPALRELFQSLPRGYSLPTNSRSGSLFGGGDEIEGDGSQLDMGVLDFNRVTASVGKGREGKGTKHFATEKQRREQLNGKYKILRSLIPSPTKMDRASVVGDAIEYIRELLRTVNELKLLVEKKRYGRERCKRQKAEDDAAESCNIKPFSDPDGCIRTSWLQRKSKDSEVDVRIVDDDVTIKLFQRKKINCLLSVAKVLDELQLELHHVAGGHVGEYCSFLFNSKIIEGSSVYASAIANRVIDVMDTQYAAAVPHTSSY* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4049 518 Gene3D - 317 394 IPR036638 GO:0046983
Ahy3g4049 518 SMART finulus 326 375 IPR011598 GO:0046983
Ahy3g4049 518 MobiDBLite consensus disorder prediction 157 181 - -
Ahy3g4049 518 Pfam Helix-loop-helix DNA-binding domain 323 369 IPR011598 GO:0046983
Ahy3g4049 518 PANTHER TRANSCRIPTION FACTOR BHLH91 19 516 IPR045895 GO:0006355|GO:0048658
Ahy3g4049 518 PANTHER TRANSCRIPTION FACTOR BHLH91 19 516 - -
Ahy3g4049 518 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 320 369 IPR011598 GO:0046983
Ahy3g4049 518 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 321 387 IPR036638 GO:0046983
Ahy3g4049 518 CDD bHLH_AtMYC1_like 325 389 IPR045896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4049 Ahy-Chr3 139849908 139852341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4049 19 516 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 35.793 8.36e-88 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy3g4049 HLH 4.50E-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4049 - - gmx:100782512 772.311