Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4040 ATGGAGGCTGAAACTACTCTTGTCCCTCCCACGGCCACACCACCACCACCACCACCTCATAATGGTGGTTTGGATTGGACAGTTGTAGCGGCGGCCATCGTGTGTGCCTTGCTATGCGCTCTAGGGCTCAACACCATGCTACAATGCGTGTTTCAGTGTGCGGGGCGTGTTCTCACGCAGCCTCTTCAATGGATCGCTTCTCGAAGGCTCAATTCCGGTCTCAAGAGGAAGGACATGGTGGCTCTCCCTACCTCAACTTTTTCTTCTTCTTCTTCTTCTTCTTCTGAAGCAGCTCCTAGTAACAATAATAATAACAACTGTGCAATATGCTTAGCAGAGTTCAGTGATGGTGAGCAAATAAGGTTTCTTCCGCAGTGCAGTCACCATTTTCACGTGGTTTGCATTGACAAGTGGCTCCTCTCTCATTCTTCTTGTCCTACTTGCAGGCACCTCCTCAAGTCTAATTCTGATTCTTCTTCGCTCCACTCTTTACATATCCTCTTAGCTTAA 510 0.4824 MEAETTLVPPTATPPPPPPHNGGLDWTVVAAAIVCALLCALGLNTMLQCVFQCAGRVLTQPLQWIASRRLNSGLKRKDMVALPTSTFSSSSSSSSEAAPSNNNNNNCAICLAEFSDGEQIRFLPQCSHHFHVVCIDKWLLSHSSCPTCRHLLKSNSDSSSLHSLHILLA* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4040 169 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 12 160 - -
Ahy3g4040 169 PANTHER OS06G0666500 PROTEIN 12 160 - -
Ahy3g4040 169 MobiDBLite consensus disorder prediction 1 20 - -
Ahy3g4040 169 Pfam Ring finger domain 105 149 IPR001841 -
Ahy3g4040 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 154 IPR013083 -
Ahy3g4040 169 SUPERFAMILY RING/U-box 103 155 - -
Ahy3g4040 169 SMART ring_2 107 148 IPR001841 -
Ahy3g4040 169 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4040 Ahy-Chr3 139777028 139777826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4040 11 152 C3H Transcription Factor Family AT2G17450 44.138 3.58e-36 122
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4311 13 142719069 142719966 Ahy3g4040 3 139777028 139777826 hybridization