Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4029 ATGGTGAAGGGTCGCCAGGGAGAACGCGTCAGACTCTACGTGAGGGGTACAATCCTTGGATACAAAAGATCCAAGTCAAACCAGTACCCAAACACATCTCTTATCCAAATCGAGGGAGTGAATACCAAGGAAGAGGTAGCATGGTATGCTGGTAAGAAAATGGCTTACATCTACAAGGCTAAGGTGAAGAAGAATGGAACTCATTACCGCTGTATTTGGGGCAAGGTTACAAGGCCTCACGGTAACAGTGGTATTGTTCGTGCAAAATTCAAGTCAAATCTTCCACCGAAATCCATGGGAGCACGTGTAAGAGTATTTATGTATCCAAGCAACATCTAA 339 0.4454 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYAGKKMAYIYKAKVKKNGTHYRCIWGKVTRPHGNSGIVRAKFKSNLPPKSMGARVRVFMYPSNI* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4029 112 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Ahy3g4029 112 Pfam Ribosomal protein L35Ae 12 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Ahy3g4029 112 ProSitePatterns Ribosomal protein L35Ae signature. 74 95 IPR018266 GO:0003735|GO:0005840|GO:0006412
Ahy3g4029 112 PANTHER 60S RIBOSOMAL PROTEIN L35A-1 1 112 - -
Ahy3g4029 112 Gene3D translation elongation factor selb, chain A, domain 4 6 112 IPR038661 -
Ahy3g4029 112 PANTHER 60S RIBOSOMAL PROTEIN L35A 1 112 IPR001780 GO:0003735|GO:0005840|GO:0006412
Ahy3g4029 112 SUPERFAMILY Translation proteins 12 106 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4029 Ahy-Chr3 139650645 139652289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4029 1 112 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 91.071 4.63e-75 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4029 K02917 - jre:108991888 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4300 13 142626701 142628334 Ahy3g4029 3 139650645 139652289 hybridization