Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4002 ATGGCTGCTCCTCTTTTTCTAAGATATCCAAATTTCCACACACTCCTTCTCAACTCTACTGCACCCAAATCTCTTTCACTTGTCAATTTCGCCAAGATGGAAGCCAGTGAGATCACAGAGCAAGTGGAAGAACAAGAGGATTTGAATGTGAAGAAGAAGAAGATCTTTGTTGCTGGAGCCTCTGGAAGCACTGGGAAGAGGATCGTTGAGCAGTTGCTCAAAAAGGGTTTTTCTGTCAAGGCTGGGGTTAGAGACTTAGACAAGGCCAGGGCCTCACTTTCCTCTAACAACCCCTCTCTTCAATTTGTAAAAGCGGATGTCACAGAAGGTTCTGACAAGCTAGCTGAAGCAATTGGTGATGATTCGGATGCAGTAGTATGCGCCACGGGATTTCGGCCAGGTTGGGATTTGCTTGCTCCATGGAAGGTTGACAATTTTGGCACAGTAAACCTAGTCGAAGCATGCAGGAAACGTAATGTTAACAGATTCATTCTTATCAGTTCCATCTTAGTCAATGGAGCAGCAATGGGACAGCTACTTAATCCAGCTTATATCTTTCTCAATGTTTTTGGACTCACCTTAGTAGCAAAACTACAAGCAGAACAATATATCAGGAAATCCGGCATAAATTACACGATAATTAGACCTGGTGGTTTGAAAAACGATCCTCCTTCTGGAAACGTTGTTATGGAACCAGAGGATACTCTTTCTGAGGGTTCCATATCCAGAGATCAAGTTGCAGAGGTAGCTGTGGAGGCATTGGCTTATCCTGAGGCATCTTATAAAGTTGTGGAGATAGTGGCTCGCCCTGATGCTCCTAAGCGCTCGTATCATGATCTTTTTGGTTCCATATGA 855 0.4398 MAAPLFLRYPNFHTLLLNSTAPKSLSLVNFAKMEASEITEQVEEQEDLNVKKKKIFVAGASGSTGKRIVEQLLKKGFSVKAGVRDLDKARASLSSNNPSLQFVKADVTEGSDKLAEAIGDDSDAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRKRNVNRFILISSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAEQYIRKSGINYTIIRPGGLKNDPPSGNVVMEPEDTLSEGSISRDQVAEVAVEALAYPEASYKVVEIVARPDAPKRSYHDLFGSI* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4002 284 Pfam NAD(P)H-binding 59 256 IPR016040 -
Ahy3g4002 284 PANTHER FLAVIN REDUCTASE-RELATED 33 284 - -
Ahy3g4002 284 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 52 267 IPR036291 -
Ahy3g4002 284 Coils Coil 28 48 - -
Ahy3g4002 284 CDD SDR_a5 54 269 - -
Ahy3g4002 284 Gene3D - 35 275 - -
Ahy3g4002 284 PANTHER - 33 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4002 Ahy-Chr3 139282943 139285149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4002 49 184 Monolignol Biosynthesis Gene Families AT2G33590 32.414 2.75e-08 52.4