Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3997 ATGATGTTGCTTTCTCCTAAGATTAGTTTGAGTGTAGTCATAGCCCTTTCCATTATAACCATACTTTCATATGCAGATAATAATACTGGGCTCTTGGAGGTTGAAATTGAAGCCTTGAAAGCTTTCAAGAACTCCATCACCCTTGACCCAAATGGAACACTTGCTGATTGGATTGAAATCCACCCTCATTGCAATTGGTCTGGCATTCAATGTGACCCTTCTTCAAGCCATGTGATCTCAATTTCTCTGACTTCTCAGCAGCTCCATGGAGAGATTTCACCATTCTTGGGAAATATTTCAAGCCTTCAGGTTCTTGATTTATCTTCAAATTCATTTACCGGCCATATTCCTTATCAGCTAAGTCGTTGCACTCAACTCACTGTGCTTGGTCTCTTTGAGAATTCTCTCTCAGGACCAATCCCTCCCGAGTTAGGAAACTTGAAAAGATTGCAGTATTTGGATTTAGGAAGTAACTTCTTGAATGGAACCCTTCCTGAGAGCATATTCAACATCACTTCTTTGTTGGGAATTGCTTTCAATAACAACAACCTCACAGGCACAATACCATCACACATAGGCAAGCTCCTTAACCTTATTCAGATGATAGGATATGGGAATAGCTTGGTTGGGTCTATACCTCCTTCAATAGGGAATCTTGAAGCTTTGAAGGCTCTTGATTTTAGCCAAAACCAGTTATCAGGTGTAATACCTAAAGAGATTGGAAACCTGACAAATTTACAATCCCTTCTCTTGTTTCAAAATTCATTGTCTGGTAAAATCCCTTCAGAACTTGCCAAGTGTAAGAATCTCTTAAACCTTGAGTTGTATGAAAATCACTTGTCTGGAAGTATTCCTCCTGAGCTAGGAAACTTAGTTCATTTGGAAACATTGAGGATATTCAGCAATAACTTGAACTCCACTATTCCACCTTCCATATTCCAATTGAAATCATTGACACATTTAGGCCTCTCAGACAATAACTTGGAGGGAACAATATCTCCTGAGATAGGATCTTTGAGTTCCTTAACATACCTAACCCTGCATCTAAATAAGTTTACCGGCCGCATCCCTTCATCCATAACAAGCTTGAAAAACTTAACATATCTTTCAATGAGCCAGAATCTTCTTTCAGGTGAAATTCCTTCAGACATTGGTGTGCTTCATAATTTGAAGTTTCTAATCTTGGGCTTCAACCATTTACATGGTTCCATCCCTCCTAGCATTACCAGTTGTACTAGCTTGGTAAATGTAAGCTTAGCTTTCAATTCATTCACTGGCAAAATTCCTGAGGGCTTTTCTAGGATGCCTAATCTTACTTTCCTATCTTTTGCTCACAACAACTTGTCCGGGGAAATCCCGGACGACCTTTTCAACTGCTCAAACCTTCATACACTAAGTTTGGGAGAGAACAATATGAGTGGAGTAATAAAACCAGGCATTCAAAACCTGTTTAAGGTTCAGACTCTGCAGCTGAATGTAAATTCCTTCATAGGATCAATTCCACCAGAGATTGGAAACTTAAGTCAGCTCATCACTTTAACCCTTGCTGAAAACAAGTTATCTGGTTCAATTCCACCAGAATTGTCCAAACTTTTTCTTCTGCAGGGGCTCTCCCTCCATGACAATGAGTTAGAAGGTACAATACCTGATACACTCTCTGGTATCAAACCACTAACAAAGCTTTTGCTGCATAGAAACAAGTTGGTTGGTCAGATACCAGATTCTATCTCACAGCTTGATATGCTTTCATATTTGGATCTCCATGACAACAAGCTGAATGGTTCCATTCCAAGAAGCATGGGGAAGCTTAGTAAGCTTTTGATGTTGGATCTCTCTCACAACCACCTCACAGGATCAATTCCTAGTGATGTCATTGCACACTTCAAAGACATGCAGATGTATCTCAACCTTTCTTACAACAACTTTGCTGGAAGTGTTCCAGATGAGTTGGGCATGTTGCAAATGGTACAGGCCATTGATATTTCAAACAATAATCTTTCAGGTGTCATTCCCGAGAGAATTTCCGGGTGCAGAAATCTGTTCAATCTTGATTTTTCAGGAAACAAGATTTCAGGCCCAATTCCTGCAGAAGCTTTTAGTCACATGGACTTGCTTGAAAACTTGAATCTTTCGAGAAACCATTTAGATGGTAAAATCCCTGAAGTCTTGGCACAACTTGAGCATCTCATTTCCATAGATCTTTCTCAGAATAACTTGAAGGGAACAATTCCTCAGGGCTTTGCCAATCTCTCCAAGCTGATGCATCTCAACCTTTCTTTCAATCAACTTGAAGGCCCTGTGCCCATGACTGGAATATTTGCACATATCAATGCATCTGATATGAAGGGAAACCAGGATCTTTGTGGAGCAAAATTCTTAAGGCCATGCAAAGAAGGTAATAATCATGCTCTATCCAAGAGGAGCATAGCTATTATCGCTGCCCTTGGATCTCTTGCAATACTTCTACTTCTAGTGCTTGTGATTTTGATTCTCAATCGAGGCAACAAACTTTACAATTCTAAACAAAAAGAGAATGGTGAGAATCAAGAACCAGATTACAGGACAGCATTGGCTCTTAAAAGATTCAGTCCAAGGGAGTTAGAGAATGCCACTGGCTTATTCAGCACTGACAACATCATTGGTGCTAGCAATTTGAGCACAGTTTACAAGGGACAACTTGAACAAGGCCAGATTGTAGCTGTCAAAAGATTGAACTTGCATCAATTCTATGCAAACACAGATAAGATCTTCAAAACAGAAGCCAGCACCTTGAGCCAGCTGAGGCATAGAAATTTGGTGAAGGTGCTTGGTTATGCCTGGGAGAGTGGGAAATTGAAAGCTCTAGTTCTAGAGTACATGGAAAATGGGAATTTGGATACCATCATACACGACAAATCGGTCGATCAGTCTAGGTGGACATTATCTGAAAGAATCCGTGTTCTGATTTCTATTGCTAGCGGATTGGACTACTTACACTCTGGTTATGACTTTCCCATTGTGCACTGTGACTTAAAACCTTCTAACATCCTTTTGGATAGAGACTGGGAAGCTCATGTCAGTGATTTTGGGACAGCTCGAATTCTTGGACTTCATTTACAGGATGGTAATACCCTTTCCTCATCTGCAGCTTTGCAAGGCACAATTGGCTATCTTGCACCAGAAATTGCCTACATAAGGAAAGTTACACCTAAAGTGGACGTGTTCGGTTTTGGCATCATTGTAATGGAATTTCTAACAAAAAGAAGGCCAACAGGACTCTCAGAAGAGGATGATGGCCTGCCAGTAAGTCTGCCTGAGGCAGTAGAAAAAGCCGTCGCGAACGGAATGAAGGAGCTCATTAATATTGTAGACCCTATGCTGGCCATGGATGACACAAAAGGCCATGTTGATGCATTGGTAGGACTCTTCAAGTTATCCTTGTGTTGTACTCTCTCCAATCCTGAAGATCGACCTAACATGAATGAGGTGTTATCTACTCTTATGAAGCTTCAAACAGCAAGATAA 3504 0.4055 MMLLSPKISLSVVIALSIITILSYADNNTGLLEVEIEALKAFKNSITLDPNGTLADWIEIHPHCNWSGIQCDPSSSHVISISLTSQQLHGEISPFLGNISSLQVLDLSSNSFTGHIPYQLSRCTQLTVLGLFENSLSGPIPPELGNLKRLQYLDLGSNFLNGTLPESIFNITSLLGIAFNNNNLTGTIPSHIGKLLNLIQMIGYGNSLVGSIPPSIGNLEALKALDFSQNQLSGVIPKEIGNLTNLQSLLLFQNSLSGKIPSELAKCKNLLNLELYENHLSGSIPPELGNLVHLETLRIFSNNLNSTIPPSIFQLKSLTHLGLSDNNLEGTISPEIGSLSSLTYLTLHLNKFTGRIPSSITSLKNLTYLSMSQNLLSGEIPSDIGVLHNLKFLILGFNHLHGSIPPSITSCTSLVNVSLAFNSFTGKIPEGFSRMPNLTFLSFAHNNLSGEIPDDLFNCSNLHTLSLGENNMSGVIKPGIQNLFKVQTLQLNVNSFIGSIPPEIGNLSQLITLTLAENKLSGSIPPELSKLFLLQGLSLHDNELEGTIPDTLSGIKPLTKLLLHRNKLVGQIPDSISQLDMLSYLDLHDNKLNGSIPRSMGKLSKLLMLDLSHNHLTGSIPSDVIAHFKDMQMYLNLSYNNFAGSVPDELGMLQMVQAIDISNNNLSGVIPERISGCRNLFNLDFSGNKISGPIPAEAFSHMDLLENLNLSRNHLDGKIPEVLAQLEHLISIDLSQNNLKGTIPQGFANLSKLMHLNLSFNQLEGPVPMTGIFAHINASDMKGNQDLCGAKFLRPCKEGNNHALSKRSIAIIAALGSLAILLLLVLVILILNRGNKLYNSKQKENGENQEPDYRTALALKRFSPRELENATGLFSTDNIIGASNLSTVYKGQLEQGQIVAVKRLNLHQFYANTDKIFKTEASTLSQLRHRNLVKVLGYAWESGKLKALVLEYMENGNLDTIIHDKSVDQSRWTLSERIRVLISIASGLDYLHSGYDFPIVHCDLKPSNILLDRDWEAHVSDFGTARILGLHLQDGNTLSSSAALQGTIGYLAPEIAYIRKVTPKVDVFGFGIIVMEFLTKRRPTGLSEEDDGLPVSLPEAVEKAVANGMKELINIVDPMLAMDDTKGHVDALVGLFKLSLCCTLSNPEDRPNMNEVLSTLMKLQTAR* 1168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3997 1167 Gene3D Ribonuclease Inhibitor 699 800 IPR032675 -
Ahy3g3997 1167 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 305 371 - -
Ahy3g3997 1167 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 168 302 - -
Ahy3g3997 1167 Gene3D Ribonuclease Inhibitor 31 180 IPR032675 -
Ahy3g3997 1167 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 120 - -
Ahy3g3997 1167 SMART LRR_typ_2 387 411 IPR003591 -
Ahy3g3997 1167 SMART LRR_typ_2 435 459 IPR003591 -
Ahy3g3997 1167 SMART LRR_typ_2 291 315 IPR003591 -
Ahy3g3997 1167 SMART LRR_typ_2 750 775 IPR003591 -
Ahy3g3997 1167 SMART LRR_typ_2 147 171 IPR003591 -
Ahy3g3997 1167 SMART LRR_typ_2 726 749 IPR003591 -
Ahy3g3997 1167 SMART LRR_typ_2 339 363 IPR003591 -
Ahy3g3997 1167 SMART LRR_typ_2 603 627 IPR003591 -
Ahy3g3997 1167 SMART LRR_typ_2 243 267 IPR003591 -
Ahy3g3997 1167 SMART LRR_typ_2 219 242 IPR003591 -
Ahy3g3997 1167 SMART LRR_typ_2 579 602 IPR003591 -
Ahy3g3997 1167 SMART LRR_typ_2 507 531 IPR003591 -
Ahy3g3997 1167 SMART LRR_typ_2 99 123 IPR003591 -
Ahy3g3997 1167 Gene3D Phosphorylase Kinase; domain 1 835 952 - -
Ahy3g3997 1167 SUPERFAMILY RNI-like 207 581 - -
Ahy3g3997 1167 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 370 1163 - -
Ahy3g3997 1167 PRINTS Leucine-rich repeat signature 222 235 - -
Ahy3g3997 1167 PRINTS Leucine-rich repeat signature 603 616 - -
Ahy3g3997 1167 SUPERFAMILY L domain-like 61 258 - -
Ahy3g3997 1167 CDD STKc_IRAK 880 1163 - -
Ahy3g3997 1167 ProSitePatterns Serine/Threonine protein kinases active-site signature. 999 1011 IPR008271 GO:0004672|GO:0006468
Ahy3g3997 1167 SUPERFAMILY L domain-like 478 804 - -
Ahy3g3997 1167 Gene3D Ribonuclease Inhibitor 433 523 IPR032675 -
Ahy3g3997 1167 Gene3D Ribonuclease Inhibitor 181 282 IPR032675 -
Ahy3g3997 1167 Gene3D Ribonuclease Inhibitor 283 379 IPR032675 -
Ahy3g3997 1167 SMART LRR_sd22_2 603 624 - -
Ahy3g3997 1167 SMART LRR_sd22_2 387 419 - -
Ahy3g3997 1167 SMART LRR_sd22_2 677 710 - -
Ahy3g3997 1167 SMART LRR_sd22_2 363 386 - -
Ahy3g3997 1167 SMART LRR_sd22_2 726 752 - -
Ahy3g3997 1167 SMART LRR_sd22_2 219 245 - -
Ahy3g3997 1167 SMART LRR_sd22_2 147 173 - -
Ahy3g3997 1167 SUPERFAMILY Protein kinase-like (PK-like) 852 1161 IPR011009 -
Ahy3g3997 1167 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 6 120 - -
Ahy3g3997 1167 SMART serkin_6 874 1161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3997 1167 Pfam Protein kinase domain 875 1093 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3997 1167 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Ahy3g3997 1167 Gene3D Transferase(Phosphotransferase) domain 1 953 1166 - -
Ahy3g3997 1167 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 370 1163 - -
Ahy3g3997 1167 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 114 168 - -
Ahy3g3997 1167 Pfam Leucine rich repeat 558 616 IPR001611 GO:0005515
Ahy3g3997 1167 Pfam Leucine rich repeat 657 715 IPR001611 GO:0005515
Ahy3g3997 1167 Gene3D Ribonuclease Inhibitor 380 432 IPR032675 -
Ahy3g3997 1167 Gene3D Ribonuclease Inhibitor 524 628 IPR032675 -
Ahy3g3997 1167 Gene3D Ribonuclease Inhibitor 629 698 IPR032675 -
Ahy3g3997 1167 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 305 371 - -
Ahy3g3997 1167 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 168 302 - -
Ahy3g3997 1167 ProSiteProfiles Protein kinase domain profile. 874 1163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3997 1167 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 114 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3997 Ahy-Chr3 139258753 139262718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3997 32 1164 Receptor kinase-like Gene Family AT5G46330 53.995 0.0 1126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Ahy3g3997 Pkinase 2.60E-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3997 K13420 - gmx:100817960 1690.63