Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3995 ATGCTAAGTCAAGGAGAAGAAACGGAGGGAGTAACAGTGACATGGGAGAATTTGTGGGTGACTGTTCCAAACGGAAAGAATACACTACCAATTCTGCAGGGCCTTACAGGCTATGCACAACCGGGGAGGCTTTTGGCTATAATGGGACCTTCAGGCTGTGGCAAAACCACACTTCTTGATGCCTTATCAGGAAGATTGAGCTCAAACATAAAGCAGAAAGGGAATATTCTAATAAATGGCCATAAACAAGAACTGGCTTATGGAATATCAGGATATGTAACACAAGACGATGCTTTGCTGTCAACTTTAACAGCTGGGGAAACTTTATACTACTCAGCACAGCTTCAATTTCCTGATTCCATGCCCATATCAGAGAAGAAGGAAAGAGCTGATGTAACTATCAGGGAAATGGGTCTGCAAAACGCCATTCACACAAGGGTTGGAGGCTGGAGTTCTAAGGGTCTCAGTGGGGGACAGAAAAGGAGACTCAGCATTTGCATTGAGATCTTAACACGCCCAAGACTCCTGTTTCTTGATGAACCAACAAGTGGACTTGATAGTGCGGCCTCCTATTATGTCATGAGAAGAATTGCTAACCTTGTTCAGAAAGATGGCATTCAAAGGACTGTTGTTGCATCAATTCATCAACCTAGCAGTGAAGTTTTTGAACTCTTCCATGACCTTTGTCTTCTGTCTTCTGGTGAAAATGTATATTTTGGTCCTGCTTCTGATGCTAATCAGTTTTTTGCTTTGAATGGTTTTCCTTGTCCGACACTCCATAATCCTTCTGATCATTACTTAAGGGTCATAAACAAAGATTTTGAACAGGAAGCTGAAGAAGGCTTTGGTAGCAGAGTAACTGCAGAGAAAGCTGATTTTGGTGCAGTAGAAAAGAAGAGGGACCATGCTGCGTTCCTGATTCAGTGCCTTGTTCTTATAAGAAGATCTGCACTGCATTATTTCCGCGACTTAAGCAATTACTGGCTGCGCCTTACTGTGTTTATTGCTATAGCTCTAAGCTTGGGCTCTATCTACTATGATATTGGCTTTGGTGTTGGATCTATTCAGGCCAGAGGATCTCTGCTTGCTTTCTTAAGTTGTCTTTTGTCTTTCATGACACTCGTTGGTGGATTTGCTCCGCTACTAGAGGAAATCAAGGTATTTGAAAGAGAGAGATTGAATGGACACTATGATGTTACAGCATTTCTCATAGGGAACACATTTTCTGCTGTTCCATACATGCTACTAGTAACTCTGGCTCCGGGACTAATATCCTATTACCTTTGTGGACTGCAAAAAGGACCAGAACACTTGGTATACTTTGTATCAGTGCTATTTGCCATAGTTATGTGGGTTGAGAGCCTCATGCTTGTTGTGGGAAGTGTCTCCCCTAACTTTGTTATAGGCATGTTGATTTCTGGTGGAATTCAAGGAATCATGACCCTAGTTGGTGGATTCTATAGGTTACCAAATGATCTTCCAAAACCCTTATGGAAATACCCTCTGTATTATGTGTCTTTTCAAAAGTATGGACTCCAAGGATTATTCAAGAATGAATTTCAAGGCTTAACATTTATGATGGGCCAAGATGGAGGTGCTAAGAATAACATAAACATTAGTGGTGGGGAAATTCTAATAAAGACATGGCACGTGGAAATGGGACATTCTAAGTGGGTTGATCTTGGAATCTTTTTTGTAATGATTGTTGTGTATAGAATGCTGTTCTTGGCAATCACTAAGAGCAAGGTGAAGTTGAGGCCTGCATCTATTTGCTGCTTTCACTAG 1785 0.4146 MLSQGEETEGVTVTWENLWVTVPNGKNTLPILQGLTGYAQPGRLLAIMGPSGCGKTTLLDALSGRLSSNIKQKGNILINGHKQELAYGISGYVTQDDALLSTLTAGETLYYSAQLQFPDSMPISEKKERADVTIREMGLQNAIHTRVGGWSSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMRRIANLVQKDGIQRTVVASIHQPSSEVFELFHDLCLLSSGENVYFGPASDANQFFALNGFPCPTLHNPSDHYLRVINKDFEQEAEEGFGSRVTAEKADFGAVEKKRDHAAFLIQCLVLIRRSALHYFRDLSNYWLRLTVFIAIALSLGSIYYDIGFGVGSIQARGSLLAFLSCLLSFMTLVGGFAPLLEEIKVFERERLNGHYDVTAFLIGNTFSAVPYMLLVTLAPGLISYYLCGLQKGPEHLVYFVSVLFAIVMWVESLMLVVGSVSPNFVIGMLISGGIQGIMTLVGGFYRLPNDLPKPLWKYPLYYVSFQKYGLQGLFKNEFQGLTFMMGQDGGAKNNINISGGEILIKTWHVEMGHSKWVDLGIFFVMIVVYRMLFLAITKSKVKLRPASICCFH* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3995 594 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 292 587 - -
Ahy3g3995 594 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 5 291 - -
Ahy3g3995 594 SMART AAA_5 41 234 IPR003593 -
Ahy3g3995 594 CDD ABCG_EPDR 10 240 - -
Ahy3g3995 594 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 292 587 - -
Ahy3g3995 594 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 5 291 - -
Ahy3g3995 594 Pfam ABC-2 type transporter 215 277 IPR043926 GO:0140359
Ahy3g3995 594 Pfam ABC transporter 33 183 IPR003439 GO:0005524
Ahy3g3995 594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 251 IPR027417 -
Ahy3g3995 594 ProSitePatterns ABC transporters family signature. 155 169 IPR017871 GO:0005524
Ahy3g3995 594 Gene3D - 11 308 IPR027417 -
Ahy3g3995 594 Pfam ABC-2 type transporter 308 520 IPR013525 GO:0016020|GO:0140359
Ahy3g3995 594 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 13 258 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3995 Ahy-Chr3 139218938 139222155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3995 5 219 Calmodulin-binding Proteins AT2G36910 28.139 8.20e-10 60.1