Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3989 ATGCAGACTCATGAATATTTTATCCCAGGAAAGATGTCACTTCCTGTGGCAGGTGAATCAGTTGATAATTATACGAACGCCCCACTCACTTCTACCTTTGATGTAGCCTTGCCTCCAGGTATGAGGCAGGTGATGCCCTTTGGAAGAGTTAAATTGCAGCCGTCTGAGGTCTGCCCAAGGAATTTCATTATCTTTGATCAAACAAATCAACAGAGCAGGATGATGTTCCATCCTGCTGTGACATATAAGTTTAATACTCCTGGTTTTGATTTTCAAGCTTCTTGCCCCCAGGATTTTGAAAAGGGTAAAGTCAATCAACTGGAAAGAGATTTGTCATCTCCGTTTGAAGAGGATTCTAATGACATTGCTGCATTGCTGAGCTTGGAAATGGATGATGAACTAGAAGACAGCATGGATGAGGAAGAAGTCAGCACAGCAAGGACTCACGACAACTATGAAAGTACATCAGATACTTGTTCGAGTTACTGCTCAAAACCATCAAAGAAGAGGTTGTCATCGAGTCTAGAGAAGTCTGCTGGGACTAGGGGTGACCAGAAAAAGCAACAGGAGATGAAGAGAATGGTGAATATGCTGAGAAGGATTGTGCCCGGCGGTGGTAACCAAATGGATGCAGTTGCTGTTTTAGATGAAGCTGTTAAGTATCTCAAATCTCTTAAGGTTGAAGTGGAGCAATTTGGAGTTGGACCCTGA 711 0.4304 MQTHEYFIPGKMSLPVAGESVDNYTNAPLTSTFDVALPPGMRQVMPFGRVKLQPSEVCPRNFIIFDQTNQQSRMMFHPAVTYKFNTPGFDFQASCPQDFEKGKVNQLERDLSSPFEEDSNDIAALLSLEMDDELEDSMDEEEVSTARTHDNYESTSDTCSSYCSKPSKKRLSSSLEKSAGTRGDQKKQQEMKRMVNMLRRIVPGGGNQMDAVAVLDEAVKYLKSLKVEVEQFGVGP* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3989 236 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 175 225 IPR011598 GO:0046983
Ahy3g3989 236 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 184 231 IPR036638 GO:0046983
Ahy3g3989 236 MobiDBLite consensus disorder prediction 149 179 - -
Ahy3g3989 236 Gene3D - 182 233 IPR036638 GO:0046983
Ahy3g3989 236 PANTHER TRANSCRIPTION FACTOR BHLH144 1 235 - -
Ahy3g3989 236 MobiDBLite consensus disorder prediction 134 190 - -
Ahy3g3989 236 PANTHER TRANSCRIPTION FACTOR BHLH145 1 235 IPR037546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3989 Ahy-Chr3 139161777 139164527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3989 31 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 42.601 3.77e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3989 - - gmx:100791998 305.064