Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3970 ATGTTTCTCTTAGTTTCTGGTTTGCTGACCAATATCTTGAACAGGGTAGATTCCGCTACCTACAAAGAGATTTCACTGTTATGGGGTCTTAAAGATGAAATTGACACCCTCAAGAACTCTCTCAGAATCATCAATGCTTTCCTTGTGGATGCTGAGAACAAGCAAACACAAAATAACGGCATCATGGAGTGGCTGCAGCAGCTCAGGGATCATTTCTTCGATGCTCGTGACATCTTGGATGAGATTGAGTGTGAAGCACTCAGGAACAAGATTGTCAAGAGCCAAGGAAGCTTCAAAAGAAAGAAATCAAGGTTGGCAAGCCATGTTGACTCCGTTGAAAGAGAGAGAAAGCACCAAGATGACTTAATAGAAAAAAAATATGGTGAGGATGAAGATGACGGTGATGTTGAAGACAATACTGATGAAATAAAACCAGAGGCAGATGAGGATGCAAATGATGATCATCGAGAGGAAGCAGAGTACTTACTAGGAGATGATGGCGCAACTGCAGAGCAGGGACTTCATGAAGGTCTACTCATAAAAGATGGAGATGAAGACAGCAAGCTTTCTGCTCGACATTTCAGCCATGGATATCACTTGACCGAAGGAAAGTTGAACCATGGAATGGAGGACTACATTTTTGCTCAACACAAGAAGCTCAATGGTTATGACTTGGGTTTGTATGCAATATTTGATGGTCATTCAGGTCATGATGTTGCCAAATACTTGCAAAGCCATCTATTTGAAAACATACTGAATGAGCCTAGTTTCTGGAAGAAACCAGTGCATGCTGTTAAGAAAGTGTGCAAGGCTACAAATGTTGAGATCTTAGAGAATATAGCTGATTTGCGGGGAGGATCGACAGCTGTTGCAGCAATACTAATTGATGGAGTGAAGCTGCTTGTAGCCAATGTTGGCGATTCTCGAGCGATATCATGCAAAAATGGTATTGCAAAACCAATAACTGCGGATCATGAACCAGAGAAGGAGAAAGATCTTGTTGAAACCAGAGGGGGCTGTGTGTTCACAAGACCAGGATCTATTCCAAGAGTGGACGGCCAATTAGCAATGACAAGAGCATTTGGAGATGGAAAACTGAAGGAGCACATTACTGCTGAGCCAGATGTGATGATTCGGAAGATTGATGATGACACTGACTTCATCATTTTGGCAAGTGATGGTTTGTGGAAGGTGATGACAAATCAGGATGCTTGTGACTGTATCAAAGATGATGTTGATGATGCTAAGAAAGCAGCTAAGAAGTTGGTTAAAGAAGCCAAGTGTCTAGGAAGCTGTGATGATATTTCATGCATAGTTGTTACGTTCTAG 1329 0.4191 MFLLVSGLLTNILNRVDSATYKEISLLWGLKDEIDTLKNSLRIINAFLVDAENKQTQNNGIMEWLQQLRDHFFDARDILDEIECEALRNKIVKSQGSFKRKKSRLASHVDSVERERKHQDDLIEKKYGEDEDDGDVEDNTDEIKPEADEDANDDHREEAEYLLGDDGATAEQGLHEGLLIKDGDEDSKLSARHFSHGYHLTEGKLNHGMEDYIFAQHKKLNGYDLGLYAIFDGHSGHDVAKYLQSHLFENILNEPSFWKKPVHAVKKVCKATNVEILENIADLRGGSTAVAAILIDGVKLLVANVGDSRAISCKNGIAKPITADHEPEKEKDLVETRGGCVFTRPGSIPRVDGQLAMTRAFGDGKLKEHITAEPDVMIRKIDDDTDFIILASDGLWKVMTNQDACDCIKDDVDDAKKAAKKLVKEAKCLGSCDDISCIVVTF* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3970 442 MobiDBLite consensus disorder prediction 109 155 - -
Ahy3g3970 442 CDD RX-CC_like 5 82 IPR038005 -
Ahy3g3970 442 Pfam Rx N-terminal domain 9 98 IPR041118 -
Ahy3g3970 442 CDD PP2Cc 194 442 IPR001932 -
Ahy3g3970 442 PANTHER PROTEIN PHOSPHATASE 2C 28-RELATED 147 442 - -
Ahy3g3970 442 Gene3D - 9 118 - -
Ahy3g3970 442 Coils Coil 405 425 - -
Ahy3g3970 442 SMART PP2C_4 185 440 IPR001932 -
Ahy3g3970 442 ProSiteProfiles PPM-type phosphatase domain profile. 195 442 IPR001932 -
Ahy3g3970 442 PANTHER ALPHABET, ISOFORM E-RELATED 147 442 - -
Ahy3g3970 442 Pfam Protein phosphatase 2C 207 435 IPR001932 -
Ahy3g3970 442 SUPERFAMILY PP2C-like 192 442 IPR036457 -
Ahy3g3970 442 Gene3D - 190 442 IPR036457 -
Ahy3g3970 442 MobiDBLite consensus disorder prediction 126 155 - -
Ahy3g3970 442 MobiDBLite consensus disorder prediction 109 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3970 Ahy-Chr3 139027154 139033110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3970 192 442 PP2C-type Phosphatase Gene Family AT3G15260 57.540 6.43e-99 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3970 - - gmx:100814772 468.774