Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3954 ATGGCAGCCTCCACCATGGCTCTCTCCTCCCCATCATTGGCTGGCAAGGCCGTCAAGCTCAGCCCATCAGTCCCTGAGCTTGGAGTTGGAAGAATCTCCATGAGGAAAACCGCCACCAAGCAAGCCACCTCAGGAAGCCCATGGTACGGTCCAGACCGTGTTAAGTACTTGGGCCCATTCTCCGGCGAGCCCCCGTCCTACCTCACTGGTGAGTTCCCAGGTGACTACGGCTGGGACACTGCTGGGCTTTCCGCTGACCCAGAGACCTTTGCCAGGAACCGTGAGCTCGAAGTGATCCACAGCAGGTGGGCCATGCTTGGGGCTTTGGGCTGTGTCTTCCCAGAGCTTTTGGCCCGCAACGGTGTCAAATTCGGAGAGGCTGTGTGGTTCAAGGCTGGATCACAGATCTTCAGCGAGGGTGGGCTTGACTACTTGGGAAACCCAAGCCTGATCCACGCACAGAGCATCTTGGCCATTTGGGCCACCCAGGTCATCTTGATGGGAGCCGTTGAGGGTTACCGTATTGCCGGTGGGCCTCTTGGAGAGGTTACTGACCCACTTTACCCAGGTGGCAGCTTTGACCCATTGGGCCTTGCTGACGACCCAGAGGCTTTCGCCGAGCTCAAGGTCAAGGAGATTAAGAACGGTAGGTTGGCCATGTTCTCCATGTTTGGATTCTTTGTTCAGGCTATTGTCACTGGTAAAGGCCCATTGGAGAACCTCGCTGACCACCTTGCTGACCCAGTCAACAACAACGCCTGGGCCTATGCCACCAACTTTGTCCCCGGAAAGTGA 795 0.5686 MAASTMALSSPSLAGKAVKLSPSVPELGVGRISMRKTATKQATSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3954 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Ahy3g3954 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Ahy3g3954 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
Ahy3g3954 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 264 - -
Ahy3g3954 264 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3954 Ahy-Chr3 138872644 138873686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3954 1 264 Chloroplast and Mitochondria Gene Families AT2G34430 89.850 2.74e-175 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3954 K08912 - qsu:112030611 524.242