Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3946 ATGGCTTCAGTTTCCGGCAACATGAAGGGTTTCTACAGGCAGAAGAAAAGCAACACCAAATCTTCCAAGAAAGCCTCTGCCAAGTCTTCCAAGAAAGCCTCTGCCAAGTCAGATGCAGCCCAACCTACCGCTCTCGTCTCTCACGAAGATGATTACAGTGCTGGCGAGGCAATGCTGCGGCAATTCGACATGAACATGGCGTATGGCCCTTGCGCTGGGATGACAAGGACGGCACGGTGGGAGCGTGCGCAGAAGCTTGGTCTCAACCCTCCACAGGAAATCGAGAAGCTCTTGAAGAGTGGCAAGGTTCAGAACGAGTCCTTGTGGGATGGTCGCATTTAG 342 0.5292 MASVSGNMKGFYRQKKSNTKSSKKASAKSSKKASAKSDAAQPTALVSHEDDYSAGEAMLRQFDMNMAYGPCAGMTRTARWERAQKLGLNPPQEIEKLLKSGKVQNESLWDGRI* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3946 113 MobiDBLite consensus disorder prediction 1 15 - -
Ahy3g3946 113 MobiDBLite consensus disorder prediction 16 30 - -
Ahy3g3946 113 Pfam DNA polymerase delta, subunit 4 16 104 IPR007218 GO:0000731|GO:0006260
Ahy3g3946 113 MobiDBLite consensus disorder prediction 1 50 - -
Ahy3g3946 113 PANTHER DNA POLYMERASE DELTA SUBUNIT 4 1 112 IPR007218 GO:0000731|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3946 Ahy-Chr3 138818446 138819350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3946 1 113 Core DNA Replication Machinery Family AT1G09815 54.839 1.75e-45 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3946 K03505 - gmx:100778329 140.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4217 13 141767289 141768154 Ahy3g3946 3 138818446 138819350 hybridization