Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3944 ATGGCTACCATTTCTGCGACTTGCTACCTCTATATTCTATCATGGTTATGGTTATGCACCATGACACTATGTGGAACAGTGTTAGAAGACCTAAAAAACTTGCATCCACCTCCAGATTTTAACTCCACAATCATGACAAACTGTCTCAATAACCCTTCGCTTAGGTACTGCAGTTCCACTCCCATGAACTTTGATGAAATATTCAAATACACCATTGTTGCTAGCCATCTCTGCAATGAATCAAAGAACCCCAATTGCATAGAATCCTTCCCCAAAGTTGATCTTAGAAACCGTCCAAACATTGCACCTCTTTACTTGTCATTTGAATTCTTCTGGAGGTATTGCCCCCTAACCATTGTTTCCATTGATGTGTCAAACAACTCTTTGAAGGGGAATTTTCCTATTGATGTTCTTCATTGCACTCAAATCCATGCTCTTGATTTAAGCATCAATGAGTTTTCTGGTGATATTCCAATTCAGAGTTTCTCTCCTCTCACCAACCTTACTTTCCTTAACCTATCCTATAACTGCTTCTCTGAGAGTGAAGAACTATCTGATTCACAGTTCTTCAAAAGGTTTAATTCTTCAAGTTTTCTTCATTCTGGTGCACTCTTGGATCACAGAAGGTTCTTCACATTGAAGGTTGTGATCTTATTGGTTGGTTTTCCCATCCTTGTCATTCTGATTGTGATATTCTTAGCATGGGTTTGTTTTCAAAGGCCTGATTTTCTTCCGAGAAAACTTCAAAGAAGAAGGACCTTCACACCTGCAATTCTAAACGCGGCTACATCTGGTTTTTCAAGCAAGAATTTAGTAGGGAAGAGTGATGTTGTTCACATCTACAAAGGGGTCTTGAGAGACGGCACACAAGTGAAAATTGAGATGTATTGGGATGAGATATCAAGGGAGAGATATCGTAAATTTGTTGAAGAATGCAAGGTGCTCTCTGAGTTAGACCACAAGAACCTTGTTAGGGTTCTAGGGTGGTGTAAGAGCAGAAAATTCAGGGCTGTTATCACAGAATGGACAAGAAAGGAGAATGTTGAAATGTGGTTATTATCAGAGTCTGCTCCACCACCATGGAGTCATAGAGTCAAAGTGTTAATGGGAGTTGTAGAATGCATGCAGTATCTGCAGGAGGAATGGCCTCAAGTTGACTATGATCTCAACACAAGTAGTGTGCTATTGACTCAAGATTTGGAACCATTAATTTCAAGGTTCAAAGTTGTAGATCATAACATTAGTACTACAAGAATATCTATTCTATTTGGTTTAGATATATGCAAGTTTGGTGTATTCATGCTGGAAGTGATACTAAATAAGGGTCAAGAGGAGTTTGAAGGGGATGCAGGTGGGTTCATTAAGTATATGAGAAGAGTTGATCCTGAAGAGTTGCAACAGATGATTGATGAGAGAATGGAACTAGGTGAGACTAGTTTTCATCAAGTTAAACAGGCTGTATCCCTTGGATTAATGTGCATAGACCAATCAAACAGTGAGCAACCGAGCTTGGCCTTCATATCTAATAGCATTGCCAGAGTCTACAAGGCTACCCTTGTTTTGCCATCTGCAAATCATACAATAACAAGATCCCATGGAGGCCATAGATTTAAGGGACACAAGACATAA 1629 0.3947 MATISATCYLYILSWLWLCTMTLCGTVLEDLKNLHPPPDFNSTIMTNCLNNPSLRYCSSTPMNFDEIFKYTIVASHLCNESKNPNCIESFPKVDLRNRPNIAPLYLSFEFFWRYCPLTIVSIDVSNNSLKGNFPIDVLHCTQIHALDLSINEFSGDIPIQSFSPLTNLTFLNLSYNCFSESEELSDSQFFKRFNSSSFLHSGALLDHRRFFTLKVVILLVGFPILVILIVIFLAWVCFQRPDFLPRKLQRRRTFTPAILNAATSGFSSKNLVGKSDVVHIYKGVLRDGTQVKIEMYWDEISRERYRKFVEECKVLSELDHKNLVRVLGWCKSRKFRAVITEWTRKENVEMWLLSESAPPPWSHRVKVLMGVVECMQYLQEEWPQVDYDLNTSSVLLTQDLEPLISRFKVVDHNISTTRISILFGLDICKFGVFMLEVILNKGQEEFEGDAGGFIKYMRRVDPEELQQMIDERMELGETSFHQVKQAVSLGLMCIDQSNSEQPSLAFISNSIARVYKATLVLPSANHTITRSHGGHRFKGHKT* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3944 542 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 7 540 - -
Ahy3g3944 542 SUPERFAMILY Protein kinase-like (PK-like) 246 510 IPR011009 -
Ahy3g3944 542 Gene3D Phosphorylase Kinase; domain 1 242 342 - -
Ahy3g3944 542 Gene3D Ribonuclease Inhibitor 70 192 IPR032675 -
Ahy3g3944 542 ProSiteProfiles Protein kinase domain profile. 266 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3944 542 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 7 540 - -
Ahy3g3944 542 Pfam Protein tyrosine and serine/threonine kinase 271 407 IPR001245 GO:0004672|GO:0006468
Ahy3g3944 542 ProSiteProfiles Leucine-rich repeat profile. 167 188 IPR001611 GO:0005515
Ahy3g3944 542 Gene3D Transferase(Phosphotransferase) domain 1 351 520 - -
Ahy3g3944 542 SUPERFAMILY L domain-like 85 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3944 Ahy-Chr3 138795929 138797871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3944 215 522 Receptor kinase-like Gene Family AT4G23190 25.634 1.03e-24 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Ahy3g3944 PK_Tyr_Ser-Thr 7.90E-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3944 - - ahf:112771647 1083.17