Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3935 ATGGAGAATAATAATAATAACAAGGAGAAGTACTATCAAGGTGATTTGAGTGACATAATCCGTGCTAGTTATGGTTATTATGGGAGCTACAACTCAGCATCATCTGAAGCTTCTTACATGGTGGAAGACCCTCCTATGATGGCAAACTTCGGTGATCCTTTCTCAAACTCGGCAGGAGATCCCTTGCTACATGATATGCCCTACTTTAACACTTTATCTTGGGGACTGGAACCTGCTACTTGTGATGATGATGATGATGATTGTATCATGACTCATCATCAAATCTCTCATCCCAACCCCAATTTATTATTACCCACCATCTCAACGTGTCAAGATTCTTCCTCCACAATAATGACAGTTAATAATAATAGTACCAAGCCTTCTTCTGCTTATTGCTTGGTGGATAATAACACAGGACCAATGGTAGTGCAGATCTCAGCTCCTGTTAATAAGCGAAGGAAAAGTCAGGCAAAGAAGTCAATTTGTATTCCAGCAGCAGCAGCACCAAGCAGTAGACAAGGTGGAGAGGTAGTTCCCTCTGATCTGTGGGCTTGGAGGAAATACGGTCAAAAACCCATTAAAGGTTCTCCATATCCAAGGGGTTACTATAGATGCAGCAGCACAAAGGGTTGCCCTGCAAGGAAACAAGTGGAGAGGAGCAGAACAGATCCAAACATGTTGGTCATTACTTATACTTCCGAACACAACCATTCATGGCCAACTCAAAGAAACGCTTTGGCTGGTTCATCACGATCCAATAAGAACACAATCACAACAACAAAGCCAGAAGAGCAACAACACAGCAACACTGACAGCAACACTGCGTTACTCGCAGTGAAGAAGGAAGACATTCATAATAATAACAATCTTGAGGACTTGTTTGCAGAATTGGGACAAGTGGAGCGTGATTATATATGCTGA 921 0.4213 MENNNNNKEKYYQGDLSDIIRASYGYYGSYNSASSEASYMVEDPPMMANFGDPFSNSAGDPLLHDMPYFNTLSWGLEPATCDDDDDDCIMTHHQISHPNPNLLLPTISTCQDSSSTIMTVNNNSTKPSSAYCLVDNNTGPMVVQISAPVNKRRKSQAKKSICIPAAAAPSSRQGGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSTKGCPARKQVERSRTDPNMLVITYTSEHNHSWPTQRNALAGSSRSNKNTITTTKPEEQQHSNTDSNTALLAVKKEDIHNNNNLEDLFAELGQVERDYIC* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3935 306 SUPERFAMILY WRKY DNA-binding domain 178 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy3g3935 306 MobiDBLite consensus disorder prediction 239 271 - -
Ahy3g3935 306 Gene3D WRKY domain 153 233 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy3g3935 306 ProSiteProfiles WRKY domain profile. 174 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy3g3935 306 SMART WRKY_cls 179 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy3g3935 306 Pfam WRKY DNA -binding domain 181 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy3g3935 306 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 96 275 - -
Ahy3g3935 306 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 96 275 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3935 Ahy-Chr3 138701412 138703788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3935 12 248 WRKY Transcription Factor Family AT1G30650 47.500 1.08e-64 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy3g3935 WRKY 9.90E-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3935 - - aip:107634728 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4204 13 141622731 141625021 Ahy3g3935 3 138701412 138703788 hybridization