Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3928 ATGGAGTCCATCTGGAAGATCAGAACCAAGACCAGCAGCAACAGGAAGCCCAGGCTAGAGCGCCTCAACGCCAGAAAGAACATCAATTACAATCCACCCGCAACTCCTCATTCGCCACCTTCTTCCTCCTCCTCTTCCTCTTCTCTCCACCACCAAACTAGCTTTAGGGTCACCGACGGCGATTTCGACCTAATCTTCCAAAGCCTGGGCCTTTCTGGCCCCGAAGATTTTTCCATTCCAACTGCAGATTGGGAAGCCAGGAAGGTTCGCTTTGCTTCTCATACTTCTAATGCTGCCGCTGAGCCCAAGGAGGATCGAAATTCAGCTGAAGTGAAATCTGGGGTTTTGCTTGATTCGGATTCCCAGCTTAAAAATGACAACTTTTCGAGACCCGTTGAAGTGGGAGGCTCCAAGTTTGGTGTTTCTTCAGATGTGAAGGTTTTGGGTGGTAAAAATGGAGATGGGGCTGGCGGGGGAGGGATCAAGGGTGCCAGGCCTCCGCTCTTGAGGCCAATTGTTGTTGATGCGGTTGGTTCGAATTGGGATTTAAAGAGGTCCTTTGGTCTCCAAGATAATTTTGTTGGTGATTCGCCTTCGTCTTCTGGTGAAATCGGCGTTGTTGGTAGGGTGAGAAATGGGGAAAGAAGCATGCTTTTTACGGATTCAGGTTCCTTTACTACGTCCCATGATGATGATAGTGATATTGGCGGGGAAAGAGCCTGTTCTGGTTCTGGCGCGGTTGATGGTTCCTTAATTGAGTGGTTTAACCGAACTTTCTCGTCGTGGCAAAAAGGTGACGTTTTGGGAAAGGGGTCGTTTGGAACCGTCTATGAAGGTTTTACAGATGATGGATTCTTTTTTGCGGTGAAGGAGGCATCTTTGCTGGATGAAGGTAGTAACCAGGGTAAACAGAGCGTATTCCAACTTCGGCAGGAAATATCTCTTTTGAGTCGGTTTCAACACGAGAATATAGTTCGATATTTTGGCACTCAAGAGGACCAAAGTTCACTTTATATCTTCCTTGAACTTGTGCCTAAAGGGTCATTGTTAAGTCTCTATCAGAAGTATAGCTTAAATGATTCTCACGTTTCTGCATACACAAGGCAGATTTTGCATGGCTTGAAATATCTTCACAATCAAAATGTGGTTCACAGGGATATCAAGTGTGCCAATATCCTGGTTGATGTAAGCGGGTCAGTCAAGCTTGCGGATTTTGGGTTGGCAAAGGCAACTAAATTTAATGATGTTAAATCAAGCAAAGGATCCCCATACTGGATGGCCCCAGAGGTTGTTAACTTGAAGAATGATGGGTATGGACTAGCAGCTGATATATGGAGCTTAGGTTGTACAGTCTTGGAGATGTTGATAGGGAAACCTCCTTACTCTGATTTGGAAGGAATGCAAGCATTATTTCGGATTGGGAGAGGAGAACCTCCGCCTATTCCTGAAACATTGTCCAAGGATGCCAGGGATTTTATCCTTGAGTGCTTACAAGTTAACCCAAGTAAACGGCCAACTGCAGCTCAGTTATTGGAACATCCATTTCTAAGGAGACCATTTCTTTCTTCCTTTTCCGCTGCGTCGCCACATATTAAAACCTTTAAGAGCTTATAG 1614 0.4554 MESIWKIRTKTSSNRKPRLERLNARKNINYNPPATPHSPPSSSSSSSSLHHQTSFRVTDGDFDLIFQSLGLSGPEDFSIPTADWEARKVRFASHTSNAAAEPKEDRNSAEVKSGVLLDSDSQLKNDNFSRPVEVGGSKFGVSSDVKVLGGKNGDGAGGGGIKGARPPLLRPIVVDAVGSNWDLKRSFGLQDNFVGDSPSSSGEIGVVGRVRNGERSMLFTDSGSFTTSHDDDSDIGGERACSGSGAVDGSLIEWFNRTFSSWQKGDVLGKGSFGTVYEGFTDDGFFFAVKEASLLDEGSNQGKQSVFQLRQEISLLSRFQHENIVRYFGTQEDQSSLYIFLELVPKGSLLSLYQKYSLNDSHVSAYTRQILHGLKYLHNQNVVHRDIKCANILVDVSGSVKLADFGLAKATKFNDVKSSKGSPYWMAPEVVNLKNDGYGLAADIWSLGCTVLEMLIGKPPYSDLEGMQALFRIGRGEPPPIPETLSKDARDFILECLQVNPSKRPTAAQLLEHPFLRRPFLSSFSAASPHIKTFKSL* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3928 537 SUPERFAMILY Protein kinase-like (PK-like) 259 523 IPR011009 -
Ahy3g3928 537 ProSiteProfiles Protein kinase domain profile. 262 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3928 537 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 14 105 - -
Ahy3g3928 537 Gene3D Transferase(Phosphotransferase) domain 1 260 534 - -
Ahy3g3928 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 382 394 IPR008271 GO:0004672|GO:0006468
Ahy3g3928 537 SMART serkin_6 262 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3928 537 Pfam Protein kinase domain 263 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3928 537 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 158 518 - -
Ahy3g3928 537 MobiDBLite consensus disorder prediction 1 53 - -
Ahy3g3928 537 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 158 518 - -
Ahy3g3928 537 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 14 105 - -
Ahy3g3928 537 ProSitePatterns Protein kinases ATP-binding region signature. 268 290 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3928 Ahy-Chr3 138628340 138632598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3928 18 520 MAP Kinase Kinase Kinase AT4G08500 45.941 8.65e-139 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ahy3g3928 Pkinase 3.90E-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3928 - K13414 aip:107631583 1001.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4199 13 141478400 141508016 Ahy3g3928 3 138628340 138632598 hybridization
Ahy3g3928 3 138628340 138632598 Ahy20g0865 20 11120549 11123244 PCT
Ahy3g3928 3 138628340 138632598 Ahy10g0599 10 6001191 6003862 PCT