Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3927 ATGTCTTCTAAAGGAAAAGAACCCCAAAACATGATGGATATTGATCTCTCTTTGAAGATAGATCATATTGAAAATAATAAAGACGGAGAAGCAACACCACCAAAAGTAGTAGCATCAGTCAAAGAGGATCTGAAGAACAAGAAGAAGGAAGAAACAAAGGCACTTAATATTAACAAAGAAGATTTTCTTGAAGCCGCAGCTGGCGAAATTGAAGATGAATTACCTTCGCAGGATAACACAAAAGCAAGAGAGTTGAGTGTGTTACAAATGGAGATGGAGAGCATGAAAGAGGAAAACAAAGTGCTGAGGAAAGTGGTGGAACAAACTATGAAAGACTACTATGATCTGCAACTCAAATTTTCAATCATCCAAGAAAACAACAATAATAAAAATAAAAGCAAGGATCATGAAATTTCTCTCTCACTTCATCGAGAAGAGAATGCAACGATAAGGAAGCTCCATGATGAAGAAGGGCCGCGGAGAATTCATCATTATCAAGATGAGATGTTTAAGTTTAACAACAAAATTGAAAAAGCCTCATCCCTTGCAAACACCGATTGCGGTGAGAGTTTAATAAGCGAGAGTGAATTGGGCTTATCGCTAAGGTTGGAGACAAGCACAAGAAAAAAGGAAAAGGAAATTGATGACGAAGAAGATCAAAAGCAAGAAGAAGAAGAGGAAGAAGAAGAGGAAGAAGAGGAGGAGAAAAAGACGCAACCTGCAAATTTTGCATCGTCGTCAGCGGCTACGAAATTGCAGCGGACACATCATCATGCGTTCCACGCTGCATCGCCTCCTAACAGAAAAGCTAGGGTTTCGGTTAGAGCAAGATGCGAGGCAGCCACCATGAATGATGGGTGCCAATGGAGAAAATATGGACAGAAGATTGCTAAAGGAAATCCATGTCCACGAGCTTACTATCGTTGCACTGTAGCCCCTGGCTGCCCCGTTAGAAAACAGGTACAGAGATGCATAGATGACATGTCGATACTAATCACAACATACGAAGGAACGCACAACCATCCACTTCCGGTGGGTGCAACTGCCATGGCTTCTTCGGCCGCAGCTTCCTTCATGTTGCTGGACTCAAGCACTTTCAACGTTAACCACCAGCAGCCATTACTACTAAACCCAAACCCTAATAATAAAGGAGTTGTTCTGGACCTGATCGCCAATGAGGCATCATCATCACTACGTTATCCCGGTTTGTCTTGGATGCAAAACAATAATCATCATCAGAAGGCGCCTGCTAGTAGAGGGATAATAATGGAGCATGGCGAAGAAAGCAAGGCAGTAGTAGATGACATGGTGAAGGTGTCGGCCATTGCGTCAGATCCTAAGTTTAGGGTTGCTGTTGCGGCGGCCATAACATCATTCATCAATAACAATAATAAAGATCATGCTATTGGAGCCACTTCTTTTGCCGCTAATAGCAGCAGCAACAGCAGGACTACTGCCAACAACACCAACAACAACTGGATCTTAGATAATAATAATAATAATAATCATTCTCTTTCTAAAGATGCTAATCCATAA 1536 0.418 MSSKGKEPQNMMDIDLSLKIDHIENNKDGEATPPKVVASVKEDLKNKKKEETKALNINKEDFLEAAAGEIEDELPSQDNTKARELSVLQMEMESMKEENKVLRKVVEQTMKDYYDLQLKFSIIQENNNNKNKSKDHEISLSLHREENATIRKLHDEEGPRRIHHYQDEMFKFNNKIEKASSLANTDCGESLISESELGLSLRLETSTRKKEKEIDDEEDQKQEEEEEEEEEEEEEKKTQPANFASSSAATKLQRTHHHAFHAASPPNRKARVSVRARCEAATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASSAAASFMLLDSSTFNVNHQQPLLLNPNPNNKGVVLDLIANEASSSLRYPGLSWMQNNNHHQKAPASRGIIMEHGEESKAVVDDMVKVSAIASDPKFRVAVAAAITSFINNNNKDHAIGATSFAANSSSNSRTTANNTNNNWILDNNNNNNHSLSKDANP* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3927 511 Coils Coil 41 61 - -
Ahy3g3927 511 ProSiteProfiles WRKY domain profile. 278 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy3g3927 511 MobiDBLite consensus disorder prediction 217 235 - -
Ahy3g3927 511 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 13 484 - -
Ahy3g3927 511 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 13 484 IPR044810 GO:0003700
Ahy3g3927 511 MobiDBLite consensus disorder prediction 206 271 - -
Ahy3g3927 511 SUPERFAMILY WRKY DNA-binding domain 276 344 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy3g3927 511 MobiDBLite consensus disorder prediction 477 511 - -
Ahy3g3927 511 Gene3D WRKY domain 268 345 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy3g3927 511 Coils Coil 207 239 - -
Ahy3g3927 511 SMART WRKY_cls 283 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy3g3927 511 Coils Coil 85 112 - -
Ahy3g3927 511 Pfam WRKY DNA -binding domain 284 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3927 Ahy-Chr3 138616730 138619093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3927 58 370 WRKY Transcription Factor Family AT1G68150 45.427 2.46e-78 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy3g3927 WRKY 1.70E-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4198 13 141462111 141464588 Ahy3g3927 3 138616730 138619093 hybridization