Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3906 ATGGTGTTGCAAGGGTTGAAGCCAATAATGCTAATGGTGTTGGTGCAGATAACATTTGTGGTGGTGAATGTGTTGTACAAGATGGCCATCAATGATGGAATGAGCATGAGGGTTGCTACTGCTTATCGCCTCATCTTTGCTTCTGCCTTCACTCTCCCCGTTGCTCTCATTTTTGATACCAACAACAACAACAATAAGCCCAAGATTACTCCAAGGGTGCTTCTTTTGGAATTTCTTTGTGGATTATTTGGCGGAACGTTATTTCTGAACTTTTACTTCGCGGCATTGGCTTTGATGCCAGCAACGTTTGTGTTGGCCATCCTTAATCTTTGTCCAGCTGTCACCTTCATCATGGCCATAACCTCAGGTTTGGAAAAGTTGAATTTGGGAGCGGCAGCAGGGAAGGCCAAAGTAATAGGAACAATAACCGGAATCAGTGGTGCAATGGTGTTGACGTTTTACAAAGGCAAACAAATTGATACATGGTCTTCTTCTTCTTCCCATATCAACCTCTTGCATCATGCACATGGCCCTGATTATGGTAACAAATTCTTGGGTTTTTCATATGCAACTGCAAGCTGCTGTTCTTTTGCATTGTGGCTCAACATTCAGGCTAAGTTGAATCAAGAATTCCCCAGGCACCACACAGGCACAGCTCTTATGTGCACTATGGCCGCATTACAATCCACTCTCTTTGCTCTCTCTCTTGATAGGGATTGGGCCTCCCAATGGAAGCTTGCTTGGAATATCAGGCTCCTCACTGTCGCTTATTCCGGAATTGTGACGTCTGGAATTGTGGTTAATATTATTGCATGGTGCGTGCATATGAGAGGCCCTCTATTTGGCTCTGTTTTCAATCCTCTGCAGCTTGTGCTTGTGGCCATAGCTGCTTCCTTCTTGTTGAATGAGAATTTATATTTAGGAAGTGTGATTGGAGGAGTGTTGATAGTGAGTGGGCTATACACAGTGCTTTGGGGGAACAGCAGAGAAACCAAACACAAGATTCAGATTCACACTCAGTTATCAGAAGAAATCACAAGAGATCCTCTTCAAGTTATTGTTATGTCCCCGCAGAAACAACAACAAAACTCATCATCAAATTCAGAATTGCCCTCCTCATAA 1122 0.4349 MVLQGLKPIMLMVLVQITFVVVNVLYKMAINDGMSMRVATAYRLIFASAFTLPVALIFDTNNNNNKPKITPRVLLLEFLCGLFGGTLFLNFYFAALALMPATFVLAILNLCPAVTFIMAITSGLEKLNLGAAAGKAKVIGTITGISGAMVLTFYKGKQIDTWSSSSSHINLLHHAHGPDYGNKFLGFSYATASCCSFALWLNIQAKLNQEFPRHHTGTALMCTMAALQSTLFALSLDRDWASQWKLAWNIRLLTVAYSGIVTSGIVVNIIAWCVHMRGPLFGSVFNPLQLVLVAIAASFLLNENLYLGSVIGGVLIVSGLYTVLWGNSRETKHKIQIHTQLSEEITRDPLQVIVMSPQKQQQNSSSNSELPSS* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3906 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 152 - -
Ahy3g3906 373 Pfam EamA-like transporter family 7 151 IPR000620 GO:0016020|GO:0016021
Ahy3g3906 373 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020|GO:0016021
Ahy3g3906 373 PANTHER WAT1-RELATED PROTEIN 8 338 IPR030184 GO:0016021|GO:0022857
Ahy3g3906 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 329 - -
Ahy3g3906 373 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 8 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3906 Ahy-Chr3 138419153 138421233 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3906 6 371 Nodulin-like Gene Family AT1G25270 38.005 2.97e-79 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3906 - - gmx:100809587 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0852 20 10990340 10992192 Ahy3g3906 3 138419153 138421233 PCT
Ahy10g0583 10 5822967 5824882 Ahy3g3906 3 138419153 138421233 PCT