Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3902 ATGGCTTCTAATGCAGCTTGTGTTAATAATTTGGTAGCAGGAGAAGTAGTTGTTGCAGCTAAGATGAGCGAAGAAGATGGCAATAATAACGTTGACTACTCACAAAGGGGTCAATGGCTTCGAGCAGCAGTTCTAGGAGCCAATGATGGGTTGGTCTCAGTTGCATCATTGATGATGGGTGTAGGAGCTGTTAAGAGAGACTCCAAAGCCATGTTACTTGCTGGCTTAGTGGGATGCATTGCAGGAGCATGTAGCATGGCATTGGGTGAATATGTTTCGGTTTCAACTCAGTATGAAGTTGAAGTTGGTCAAATCAAAAGGGACATGATGATCATGATGGAGAACAAGAATGAGATGGAGAAAAAGAGGAGGTCATTGCTCCCTAACCCTTTGCATGCTGCTTTGGCATCTGCATTGTCATTTACTGTAGGTGCAGTCATTCCTTTGGTTTTCACTGCATTTGTGAGGGACTATAGGTTAAGGCTTGGGTTGTGTGTGGTGGTGTCTAGCTTGTCTTTGGTGGGGTTTGGATGCTTGGGTGCTGAGTTGGGACACACACATAAGGTTAAGTCCTCTATCAGGATCCTTATTGGGGGCTTGTTGTCTATGGCTATCACTTTTGGGTTAACCAAATTAGTAGGCTTTAGTGCTAATTTGGAATTGTGA 666 0.4399 MASNAACVNNLVAGEVVVAAKMSEEDGNNNVDYSQRGQWLRAAVLGANDGLVSVASLMMGVGAVKRDSKAMLLAGLVGCIAGACSMALGEYVSVSTQYEVEVGQIKRDMMIMMENKNEMEKKRRSLLPNPLHAALASALSFTVGAVIPLVFTAFVRDYRLRLGLCVVVSSLSLVGFGCLGAELGHTHKVKSSIRILIGGLLSMAITFGLTKLVGFSANLEL* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3902 221 Pfam VIT family 111 210 IPR008217 GO:0005384|GO:0030026
Ahy3g3902 221 Pfam VIT family 40 120 IPR008217 GO:0005384|GO:0030026
Ahy3g3902 221 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 22 214 IPR008217 GO:0005384|GO:0030026
Ahy3g3902 221 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 22 214 - -
Ahy3g3902 221 CDD Nodulin-21 38 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3902 Ahy-Chr3 138372672 138373650 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3902 24 214 Nodulin-like Gene Family AT3G43660 58.115 1.71e-76 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3902 K22736 - gmx:100791523 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4178 13 141279362 141282248 Ahy3g3902 3 138372672 138373650 hybridization