Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3901 ATGATCTCTCTGTCTATAAATACTCTTCACTACAAGCGTGTGTTCTCCACAAGCTCTTCAAATTCCTTTCTCCCTCTCTACCTTACTATATTTAACAACTCTCTATTACCATTATTTCCCTTCTCCTTCATGGCTTCCACTAATGGAACTTCACCTAACCACATTGAAATTCCCATGCATGCAAATGGTGCTGCTCTTGTGGTGCAGCCAAAACCAAACCAAGTGGTTGACCAAGAGAGCAATACTAACTACACTCAAAGGGCTCAGTGGCTCCGAGCAGCAGTGCTCGGAGCCAACGACGGACTAGTCTCAGTTGCATCACTCATGATGGGTGTTGGAGCTGTTAAGCATGACATCACAGCCATGGTTCTAGCAGGCTTTGCCGGCCTAGTAGCCGGAGCATGCAGCATGGCAATCGGAGAGTTTGTCTCTGTGTACACTCAGTATGACATAGAGAAGGCTCAGATAAAGAGAGAAGAAGAAGAAGTAGCGGATCATGAGAGGGAGAAGCTGCCAAATCCATTTCAAGCTGCAGCAGCATCAGCAGTGGCATTTTCTGTGGGTGGTGTGGTGCCAATGCTAGCAGCTTTGTTCATAAGGAACCATAAGGTTAGAATGGGTGTTGTTGCTGTTGCTGTTAGCTTAGCATTGTTGGTGTTTGGAATTTTTGGAGCCATTCTTGGTAGAACTCCTGTCACAAGATCCTGTCTCAGGGTTCTCATTGGAGGTTGGATGGCTATGGCTATCACTTTTGGCTTCACCAAGTTGCTTGGCTCTGTTTCACTTTAG 789 0.4613 MISLSINTLHYKRVFSTSSSNSFLPLYLTIFNNSLLPLFPFSFMASTNGTSPNHIEIPMHANGAALVVQPKPNQVVDQESNTNYTQRAQWLRAAVLGANDGLVSVASLMMGVGAVKHDITAMVLAGFAGLVAGACSMAIGEFVSVYTQYDIEKAQIKREEEEVADHEREKLPNPFQAAAASAVAFSVGGVVPMLAALFIRNHKVRMGVVAVAVSLALLVFGIFGAILGRTPVTRSCLRVLIGGWMAMAITFGFTKLLGSVSL* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3901 262 Pfam VIT family 91 168 IPR008217 GO:0005384|GO:0030026
Ahy3g3901 262 Pfam VIT family 168 254 IPR008217 GO:0005384|GO:0030026
Ahy3g3901 262 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 47 259 IPR008217 GO:0005384|GO:0030026
Ahy3g3901 262 Coils Coil 149 169 - -
Ahy3g3901 262 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 47 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3901 Ahy-Chr3 138371446 138372612 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3901 77 259 Nodulin-like Gene Family AT3G43660 67.760 1.27e-90 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3901 K22736 - gmx:100802489 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4177 13 141276374 141277799 Ahy3g3901 3 138371446 138372612 hybridization