Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3900 ATGGCTGCTTCACTTGACACTCAGAACAAAAATGAAATGCCAGTTAAACATGTTGTGATCCACATGCATGGTACTAGTGATGCAGAAGCAGAAAAGGCAACTCAAGGAACTGAAGGAAACAATAACACTACTGACTACTCTCAAAGAGCACAGTGGCTCCGAGCAGCAGTGCTCGGAGCCAATGATGGACTTGTGTCAGTGGCATCACTCATGATGGGTGTTGGAGCTGTGAACAAGGACATTGCAGCCATGCTCCTAGCCGGATTCGCGGGGCTAATAGCCGGAGCATGCAGCATGGCAATTGGAGAATTTGTCTCTGTCTACACGCAACTAGACATAGAAGTAGCTCAAATAAAAAGAGAAAGGGAACTCAACAATGAATTGGAGACAAGAGAAGGTGGTAGTGAAGAGGAGAGGCTGCCGAATCCTTTTCAAGCTGCGATAGCGTCTGCAGTCGCATTTTCTGTTGGTGCAGCGGTGCCACTGATAGCAGCAGTGTTTATAAGAGAGTATAAGATCAGGGTTGGAGTTGTTGCTGCTGTGTCTAGCTTGGCATTGTTGGTATTTGGAGGGGTAGGAGCAGTGCTTGGAAAAACTCCAGTGAGAAGGTCTTGTATCAGAGTTCTGATTGGAGGTTGGTTGGCTATGGCTATTACTTTTGGCCTCACCAAGTTAATAAGCTTAAAGGGAATGTAA 696 0.4626 MAASLDTQNKNEMPVKHVVIHMHGTSDAEAEKATQGTEGNNNTTDYSQRAQWLRAAVLGANDGLVSVASLMMGVGAVNKDIAAMLLAGFAGLIAGACSMAIGEFVSVYTQLDIEVAQIKRERELNNELETREGGSEEERLPNPFQAAIASAVAFSVGAAVPLIAAVFIREYKIRVGVVAAVSSLALLVFGGVGAVLGKTPVRRSCIRVLIGGWLAMAITFGLTKLISLKGM* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3900 231 Pfam VIT family 53 129 IPR008217 GO:0005384|GO:0030026
Ahy3g3900 231 Pfam VIT family 134 223 IPR008217 GO:0005384|GO:0030026
Ahy3g3900 231 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 227 IPR008217 GO:0005384|GO:0030026
Ahy3g3900 231 CDD Nodulin-21 51 200 - -
Ahy3g3900 231 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 1 227 - -
Ahy3g3900 231 Coils Coil 111 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3900 Ahy-Chr3 138367035 138370021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3900 38 231 Nodulin-like Gene Family AT3G43660 63.107 7.73e-89 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3900 K22736 - gmx:100817158 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4176 13 141271165 141274829 Ahy3g3900 3 138367035 138370021 hybridization