Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3893 ATGCTAGCAACACTTTTGAGTAAACTCTTGAGCAACTACTCATCCTATTTTAAGATCTTCAATGTTCTCATATTTTTAGTAACCAAATCCAAATTCACAAACATGGCAGCAGTGCATGCATTTGGCACCCTGTTGCTTGTTCTTTCCTCTCTGTTGAGCATTGTAATTGTATCCTCTGATATCAATTTTGTACAAAATGGATTTCTAGCAGCAGGCTTGAAACTTGATGGATCTTCTTATCTGGGGCCTAACGGTATACTTACCTTGACCAACGATTCCTCAAGGATCCTTGGCCATGCATTCTATCCATCTCCTTTACCATTCAAATCTAGCAGAAACAAATCCTTTGTTGCAACCTTTAGCACTTCCTTTGTGTTCTCCATCATTCCCAAATACCCTGAACTTGGTGGACATGGTCTTGCTTTCGTCCTAATATCGACAAGAGCACCGAAAGGTTGCCTTTTAAACCAATATTTAGGCCTCCCAAATGAGACAAGTAATCAAGAATTCTCTACCAGGTTCGTAGCTATAGAGTTTGATGGGATACAAAACCTTGAACTACAGGACATTGATGACAATCATGTGGGAATCGATATCTCCAGCCTCATCTCTGTGGTATCTGAGTCAGCAGCATACTATGGAAATGGCCAAGATCTCAGCAAGAACATTCCAATTAATCTCAAGAGTGGAGACCCCATTCAAGCATGGGTTGATTACAATGAAGAGAAGAAGTTGATGAATGTTACAATCTCTCCTTTTGGCATGCCAAAGCCATATTTCCCTCTGATATCTTTTCCTTTAGACCTATCTTTGGTGTTTAATGACTACATGTATGCAGGATTTTCTGCGTCCAATGGTTTATTGATAGCTGAGCATAATATACATGGTTGGAGCTTCACCATTGGAGGAGAAATGCAAGAGCTAAATAAATCAACTCTTCCACTCATTCGATCAAGTAGTACAAATAAAGTGGCGCATAGAAAAGCTTTGGCATTAAGCATCACTCTGGCAACTCTGTGTGTCTTGGTAATCATAGCAGCTACTATCATCCTGCGCGGATTAAGAAATAAGGACGAGATCTTAGAAGACTGGGAACTCAAATATGGAGCTTATAGATTTGGATACTCTGAGCTCTATTCAGCTACAGGAAGGTTTGGTGAGAAAAACCTTATTGGGTGTGGAGGATTTGGGAGAGTATACAGAGGAGTATTACCAACAGGACTTGAAGTAGCTGTGAAGCGAGTCACTCCTAATTCAAGGCAGGGAATGAGAGAATTTGTTGCAGAAATAACAAGCATGGGGAATCTAAGGCATAGAAATCTGGTGCAGTTACATGGGTGGTGCAGGAAGCAGGATGAACTCCTCCTTGTTTATGACTATGTCCCAAATGGAAGCCTGGATGCGCTTTTATTTGAGAATGATCATCAAAAGAAGAAGTTACTAACTTGGGACCAGAGATACAAGATCGTTACTGGTGTTGCACAAGGGCTGCTATACCTCCATGAAGAATGTCCACTGCAGGTGGTTCACAGAGATGTAAAGCCAAGCAATGTCTTGATAGATGCAGATCTGCAACCAAGGCTTGGTGATTTTGGCTTAGCAAGGTGTCAGGAGCACGGAATCAATCCGAAGACAACACATGTAGTAGGAACACTAGGATACATTGCACCTGAACTCTCCAAGACTGGGAAAGCAACAAGAAGCACGGATGTATATGGGTATGGTGTACTCATTTTGGAAGTAGCTTGTGGAAGAAGGCCAATAGAGCCCCAGAAGACTCCCAGGGAGCTGGTATTAGTGGACTGGGTGAGTGAACTACACTGCCAAGGGGAGATCGGCAGAGCAGTTGACCCAAGTTTAGATGAGTATGACAAAGATGAAGCTGATCTTGTGCTTAGGCTTGGATTGCTTTGTTGTCATCCCATACCTGATTATAGGCCTAATATGAGAAGAATTGTCCAGTTCCTTCTTAAAGAAACCACCCTTCCTCCAGTTCTTCCTGACATTTGTTGTGCCTGGGAACCTCCTAGAGCAATGAAGGAATATGAGCAAAATATTCGAGATGATTCTGACCCTTCAAGCTCTGGAGTGTTCTCATCAAACTATTTTAGTCATACAAGCTTTGACAAGTGA 2133 0.4201 MLATLLSKLLSNYSSYFKIFNVLIFLVTKSKFTNMAAVHAFGTLLLVLSSLLSIVIVSSDINFVQNGFLAAGLKLDGSSYLGPNGILTLTNDSSRILGHAFYPSPLPFKSSRNKSFVATFSTSFVFSIIPKYPELGGHGLAFVLISTRAPKGCLLNQYLGLPNETSNQEFSTRFVAIEFDGIQNLELQDIDDNHVGIDISSLISVVSESAAYYGNGQDLSKNIPINLKSGDPIQAWVDYNEEKKLMNVTISPFGMPKPYFPLISFPLDLSLVFNDYMYAGFSASNGLLIAEHNIHGWSFTIGGEMQELNKSTLPLIRSSSTNKVAHRKALALSITLATLCVLVIIAATIILRGLRNKDEILEDWELKYGAYRFGYSELYSATGRFGEKNLIGCGGFGRVYRGVLPTGLEVAVKRVTPNSRQGMREFVAEITSMGNLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDALLFENDHQKKKLLTWDQRYKIVTGVAQGLLYLHEECPLQVVHRDVKPSNVLIDADLQPRLGDFGLARCQEHGINPKTTHVVGTLGYIAPELSKTGKATRSTDVYGYGVLILEVACGRRPIEPQKTPRELVLVDWVSELHCQGEIGRAVDPSLDEYDKDEADLVLRLGLLCCHPIPDYRPNMRRIVQFLLKETTLPPVLPDICCAWEPPRAMKEYEQNIRDDSDPSSSGVFSSNYFSHTSFDK* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3893 710 Pfam Protein kinase domain 387 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3893 710 Gene3D Transferase(Phosphotransferase) domain 1 461 662 - -
Ahy3g3893 710 CDD lectin_legume_LecRK_Arcelin_ConA 61 303 IPR001220 GO:0030246
Ahy3g3893 710 SMART serkin_6 385 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3893 710 ProSitePatterns Protein kinases ATP-binding region signature. 391 413 IPR017441 GO:0005524
Ahy3g3893 710 SUPERFAMILY Protein kinase-like (PK-like) 368 673 IPR011009 -
Ahy3g3893 710 ProSiteProfiles Protein kinase domain profile. 385 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3893 710 Pfam Legume lectin domain 61 313 IPR001220 GO:0030246
Ahy3g3893 710 CDD STKc_IRAK 391 658 - -
Ahy3g3893 710 SUPERFAMILY Concanavalin A-like lectins/glucanases 61 304 IPR013320 -
Ahy3g3893 710 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.2-LIKE 96 695 - -
Ahy3g3893 710 PANTHER - 96 695 - -
Ahy3g3893 710 Gene3D - 59 324 - -
Ahy3g3893 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 508 520 IPR008271 GO:0004672|GO:0006468
Ahy3g3893 710 Gene3D Phosphorylase Kinase; domain 1 351 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3893 Ahy-Chr3 138287186 138289597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3893 60 683 Receptor kinase-like Gene Family AT3G55550 47.344 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ahy3g3893 Pkinase 3.20E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3893 - - ahf:112792279 1389.79