Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3885 ATGGAGCGAGTGGTTTCATGTTTAATGGGATTGGGACCGTTTCTTCTTTATGCAGCTTTGGTATTTGATGTTATGCTTGAGGTTTCTGGCAATCAAGAAGGTGATGCCCTGAATGCATTCAAGACTCAGAGAGACTTGAAAGATCCTAATAATGCTCTTCAAACCTGGGATCCCACTCTTGTAAATCCTTGCACATGGTTTCATGTCACTTGCAACCAAGATTATAGTGTGACCAGCATTGATCTTGGAAATGCACAGATTTCGGGTCATCTTGTTCCAGAACTTGGTAAACTTCAGAATTTGCAAAGGCTGGAACTTTTCAATAATGATTTAACTGGGCCTATCCCAAATGAGCTTGGAAATTTGATAAATTTGGAGAAGTTGGATCTTTACTCAAACAACTTAACTGGTGTCATACCAGACACATTGGGCAACCTTAAAAATTTACATGACCTGCGTCTCAACAACAACAGTTTGTCAGGAAAAATTCCCATATCTTTGACCAATATTTTGACTCTGCAAGTCCTTGATTTATCATACAACCAGTTAACAGGAAATATTCCAGTCAATGGTTCATTTTCATCATTTACCCCCGTCAGTTTCGAACATAACCACTTGAATGAAACAAAAAATCCATCTCCACGCTATGTTCTGCCACAAAATACCAAGTCAGGTAAGAGTGCCATCGGAGCTATTGCTGGAGGAGTTGCTGCTGGAGCTGCTTTATCAATTGCAGCCCCTGTGATTGTAGTTGCTTACTGGCTACGAAGGAAACCACAGGATGAGTACTTTGATGTTCCTGCTGAGGAGGATCCTGAAGTTCACCTTGGTCCGCTTAAGAAGTTTTCTCTTCGTGAGCTGCAAATTGCTACAGATCACTTCAATGCCAAAAATGTGTTGGGAAAGGGTGCGTTTGGTAAGGTTTATGAAGGACGCTTAGCCGATGGCAAGCCAGTAGCAGTGAAAAGACTTAAAGAGGAACGCTCCTACAGTGAGGACTGTCAGTTTCAAATGGAAGTGGAAATGATTGGCCTGGCTAAGCATCGCAATTTGCTTCAGCTGCTTGGTTTTTGTATGACTCCTACTGAACGCATGCTTGTGTATCCTTTGATGGTTAATGGAAGTCTAGCATCTTGCTTAAGAGGGCGTGCGCCATCAAAACCGCCGCTTGGTTGGGCACAACGGGAGTCTATTGCGCTGGGATCTGCCAAGGGGCTTGCTTATTTGCATGAGCAGTGTAACCCGAAGATTATTCATCGTGATGTTAAAGCTGATAATATATTGCTAGACGAACACTTTGAAGCAGTTGTTGGAGATTTTGGTTTAGCAAAGCTTATGGAGTTTAAAGATACTCATGTTACCACAGCTGTAAAAGGGACAATTGGACATATAGCACCCGAATACCTCGGAACTGGAAAGTCTTCGGAGAAGACTGATGTTTATGGATATGGTGTGATGCTTCTTGAACTAATAACTGGACAGAGGTCTTTCGACATGGCAAGGATTGCCAGAGATGAAGAAATCTTATTGCTTGCTTGGGTAAAAGGGCATCTGAATGACAAGAAGTTGGACAAACTGGTGGATAGTGATTTACAGGGAGACTATAACTTAGAAAAGGTGGAGCAATTAATCCAAGTGGCCATATTATGCACACAAGACTCTCCTATGGATAGGCCTAACATGTCTGAGGTAGTGAGAATGCTGGAAGGTGATGGTTTGGCTGAAAGATGGGAGGAATGGAAGAAAAGGGACAAGATCCGGCAAGAATTCGACCGCACCCACCGTTATGTTGCCAATTTGAGGAACCGTGACGAGTCAACCTCAAATGCCAACATGGAACCAGAACAACTCTCAGGTCCTAGATGA 1866 0.4287 MERVVSCLMGLGPFLLYAALVFDVMLEVSGNQEGDALNAFKTQRDLKDPNNALQTWDPTLVNPCTWFHVTCNQDYSVTSIDLGNAQISGHLVPELGKLQNLQRLELFNNDLTGPIPNELGNLINLEKLDLYSNNLTGVIPDTLGNLKNLHDLRLNNNSLSGKIPISLTNILTLQVLDLSYNQLTGNIPVNGSFSSFTPVSFEHNHLNETKNPSPRYVLPQNTKSGKSAIGAIAGGVAAGAALSIAAPVIVVAYWLRRKPQDEYFDVPAEEDPEVHLGPLKKFSLRELQIATDHFNAKNVLGKGAFGKVYEGRLADGKPVAVKRLKEERSYSEDCQFQMEVEMIGLAKHRNLLQLLGFCMTPTERMLVYPLMVNGSLASCLRGRAPSKPPLGWAQRESIALGSAKGLAYLHEQCNPKIIHRDVKADNILLDEHFEAVVGDFGLAKLMEFKDTHVTTAVKGTIGHIAPEYLGTGKSSEKTDVYGYGVMLLELITGQRSFDMARIARDEEILLLAWVKGHLNDKKLDKLVDSDLQGDYNLEKVEQLIQVAILCTQDSPMDRPNMSEVVRMLEGDGLAERWEEWKKRDKIRQEFDRTHRYVANLRNRDESTSNANMEPEQLSGPR* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3885 621 Pfam Protein tyrosine and serine/threonine kinase 296 568 IPR001245 GO:0004672|GO:0006468
Ahy3g3885 621 Pfam Leucine Rich Repeat 100 122 IPR001611 GO:0005515
Ahy3g3885 621 Pfam Leucine rich repeat N-terminal domain 31 72 IPR013210 -
Ahy3g3885 621 SMART serkin_6 294 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3885 621 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
Ahy3g3885 621 MobiDBLite consensus disorder prediction 601 621 - -
Ahy3g3885 621 Gene3D Ribonuclease Inhibitor 29 213 IPR032675 -
Ahy3g3885 621 ProSiteProfiles Protein kinase domain profile. 294 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3885 621 Gene3D Phosphorylase Kinase; domain 1 263 369 - -
Ahy3g3885 621 Pfam Leucine rich repeat 124 183 IPR001611 GO:0005515
Ahy3g3885 621 SUPERFAMILY L domain-like 36 209 - -
Ahy3g3885 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Ahy3g3885 621 Gene3D Transferase(Phosphotransferase) domain 1 371 588 - -
Ahy3g3885 621 SUPERFAMILY Protein kinase-like (PK-like) 273 569 IPR011009 -
Ahy3g3885 621 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 32 621 - -
Ahy3g3885 621 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1-RELATED 32 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3885 Ahy-Chr3 138208778 138213658 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3885 13 621 Receptor kinase-like Gene Family AT4G33430 62.671 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Ahy3g3885 PK_Tyr_Ser-Thr 1.30E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3885 K13416 - gmx:100800522 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4163 13 141118183 141123154 Ahy3g3885 3 138208778 138213658 hybridization