Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3881 ATGGATGCTTTGTTGTTGAGCTCATTTCAGTGCCTTCCATGGCTCTCATCAACCAAGCAGCAAAGGCACTATTCTCATATGCATCTTTCATGCAGAGCCACAAAGGTGGAGTGTGAGAGCAACTTCTACAAGGTTCTGAGTGTTAGTCCAAAGAGTGCAACCATGGATGAGATCAAGAGAGCTTATAGATCCATGGCGCTTCAGTACCATCCAGATGTGTGCCATGATCCTTCCATGAAGGAGGAGTCTAATAGGATGTTTGTGCAGTTGAATGCTGCTTATGAGACCTTGTCCAACCCCATGCTTAGACAACAGTATGATAGTCAATTAGGTTTGAGTGTCAGCCATGATTATTCTGAAACAAGTTTGAGGAGCCTTTGGGAGGAGGAGCAACACCAAGTGGTTGTTGAATTGAAGACAAGGTCTCGGAGACGCATGGAGCAAAAGGCCAACAGAATGAGGGCACCAACCAGAAGAAAAGACAGGAACTGA 492 0.4553 MDALLLSSFQCLPWLSSTKQQRHYSHMHLSCRATKVECESNFYKVLSVSPKSATMDEIKRAYRSMALQYHPDVCHDPSMKEESNRMFVQLNAAYETLSNPMLRQQYDSQLGLSVSHDYSETSLRSLWEEEQHQVVVELKTRSRRRMEQKANRMRAPTRRKDRN* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3881 163 ProSiteProfiles dnaJ domain profile. 41 110 IPR001623 -
Ahy3g3881 163 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 18 161 - -
Ahy3g3881 163 Gene3D DnaJ domain 26 137 IPR036869 -
Ahy3g3881 163 CDD DnaJ 41 99 IPR001623 -
Ahy3g3881 163 SUPERFAMILY Chaperone J-domain 28 106 IPR036869 -
Ahy3g3881 163 ProSitePatterns Nt-dnaJ domain signature. 87 106 IPR018253 -
Ahy3g3881 163 Pfam DnaJ domain 41 107 IPR001623 -
Ahy3g3881 163 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 18 161 - -
Ahy3g3881 163 MobiDBLite consensus disorder prediction 141 163 - -
Ahy3g3881 163 SMART dnaj_3 40 102 IPR001623 -
Ahy3g3881 163 PRINTS DnaJ domain signature 62 77 IPR001623 -
Ahy3g3881 163 PRINTS DnaJ domain signature 82 102 IPR001623 -
Ahy3g3881 163 PRINTS DnaJ domain signature 44 62 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3881 Ahy-Chr3 138190011 138190681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3881 43 108 C2H2 Transcription Factor Family AT1G74250 44.118 1.02e-07 48.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4159 13 141091335 141092039 Ahy3g3881 3 138190011 138190681 hybridization