Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3876 ATGGGATTTTCTCTTTTTGGTCTTCAACAACTTGTTACTTCTTTTGCAGTTGTTGCCACATTATTGAGCATTGTTGGCACAGCACAAGAGGGTCCTATCAATTCTTTAAGCCGTAGATTTATCCATTCCCACATCAATGAACAAGAAAACGATAACAATAATTCTCCTATTATTGCTCGCGTACTGCAAGATAATCAAGGCAACGATTCTCCATCACCAGGTCACAACAATACTCCAGCTTTGTTATTAATCCTGAATGTGGTTCTTGTTCTTGCAATCATACTGCTCTTGATGCTATACTACAACACAGCAAGAAAACTGAACAAGATGATGAAGTTGCAGCAGCAGGATCCCAATAACAAAAAATGCATTGTTGTGAAGAAAGAGGTGGAAAAAGAGGATATTGAAGAGAGCAGCGGTTGGGAGAAGAAGATAGAGATAGGAGAAGGTACAAAGATGAGGGTGGAGGAGAGAAAAGAACTCATGTTCTTCAACGGCAACAAGACAAGGTTTGAGATGGGACAACTTCTAAGGGCGTCAGCAGAGACACTGGGACAGGGAATGATGGGAAACAGTTACAAGGCCATGATGCATGATGGACCGACCATTGTTGTGAAGAGGCTGAGGGACTTGAAACCTTTCAGTGAGAAGGAATTCGAAGCACTGCTGCGTGTCATTGCAGGGATGCAGCACCCTAATTTGTTGCCTTTGCTTGCTTACTACCATTCAAGAGATGAAAAGCTGCTTCTCTACAAATATGCACAGAATGGGAACCTTTTCTCTAGGCTTCACGATGGTAGAGATGGAAATCGGGTGCCATTGAAATGGAATTCAAGGCTATCAATTGCAAAATCCGTAGCTGGAGCAATGGAGTACCTGCACAGTAACACCAAGAACCCTAACATTGTCCCACACGGCAACCTCAAGACCACAAACGTGCTCATAGACGAAAACGACGTCGCCCTCGTCTCCGACTACGGCCTCTCCGCCCTAATAGCCCAACCTATCGCCGTTCAGCGCATGGTCATTTATAAGTCACCGGAATACGTCCAGTCAAAGCGAGTGACAGCGCAGTCCGATGTTTGGAGCTACGGATGCCTCCTCCTCGAGCTCTTAACCGGAAAAATTTCTGCCTGCTCTTCTCCGCATGGATCGAACGGTGTTGATCTGTGCGGTTGGGTTCATAGAGCGGTGAGGGAGGAATGGACGGCTGAGATCTTTGATAAAGAGATCTATAGGCAGAAGAATGTTCAGAGTGGGATGATACGGATGCTTGAGATTGCGATGCTTTGTACGGAGAGGTTCCCGGAGAATCGGCCTGGGATGAGCCAGGTTGTTAGGGAAGTTGAGAAGATACAGGCGGTGCCGGCGGCGTCGGAGTCGGTGGATGAGGATGATCTCTCTGCTGAGAGGTCTTTCACTGATGATTCTCTTTCTATGTATTCAACAAGTCACTCTGGAATTATTCTTGCAGATAATTAA 1482 0.4588 MGFSLFGLQQLVTSFAVVATLLSIVGTAQEGPINSLSRRFIHSHINEQENDNNNSPIIARVLQDNQGNDSPSPGHNNTPALLLILNVVLVLAIILLLMLYYNTARKLNKMMKLQQQDPNNKKCIVVKKEVEKEDIEESSGWEKKIEIGEGTKMRVEERKELMFFNGNKTRFEMGQLLRASAETLGQGMMGNSYKAMMHDGPTIVVKRLRDLKPFSEKEFEALLRVIAGMQHPNLLPLLAYYHSRDEKLLLYKYAQNGNLFSRLHDGRDGNRVPLKWNSRLSIAKSVAGAMEYLHSNTKNPNIVPHGNLKTTNVLIDENDVALVSDYGLSALIAQPIAVQRMVIYKSPEYVQSKRVTAQSDVWSYGCLLLELLTGKISACSSPHGSNGVDLCGWVHRAVREEWTAEIFDKEIYRQKNVQSGMIRMLEIAMLCTERFPENRPGMSQVVREVEKIQAVPAASESVDEDDLSAERSFTDDSLSMYSTSHSGIILADN* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3876 493 Pfam Protein kinase domain 181 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3876 493 PANTHER OS05G0588300 PROTEIN 64 484 - -
Ahy3g3876 493 PANTHER RECEPTOR-LIKE KINASE 64 484 - -
Ahy3g3876 493 ProSiteProfiles Protein kinase domain profile. 178 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3876 493 SUPERFAMILY Protein kinase-like (PK-like) 182 455 IPR011009 -
Ahy3g3876 493 Gene3D Phosphorylase Kinase; domain 1 143 253 - -
Ahy3g3876 493 Gene3D Transferase(Phosphotransferase) domain 1 254 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3876 Ahy-Chr3 138147362 138149446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3876 123 471 Receptor kinase-like Gene Family AT5G58300 41.360 1.65e-85 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ahy3g3876 Pkinase 1.30E-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3876 - - mtr:MTR_2g008740 522.702