Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3871 ATGAATTTGTTCCATTTTCTCTTCCTACCTCTTCTTCTTCTTGTCTCCCTTTTCTGTTATATCAGTGTTTCTTTAGCGCAAAATTGTAACAGTAAAATTTCACGTACTATTATAGTTGATCAATCTGGGAAGTCAAAATTTAAAACCGTTCAATCTGCAATTGATTCAATACCTGAAAATAACAACCAATGGGTGAAAATTCACATCAATGCTGAAACCTACAAAGAGAAGGTTCATATTCCGTGTCAGAAGCCATGCATTTTTCTGGAAGGGGAAGGCATAGACGTTACTACCATTACATACAATGATCACCAATCAACTGATCAAAGTGCCACATTCTCTTCTTCTCCAGACAATGTCGTTGCAAGTAAGATTACATTTAAGAACTCGTTCGATGTGGGGAAAATGTTGAGTTTGAAAGAAATAAAGGATGGAAATTATGCTGTGCCAGCACTATCAGCAAGAATATATGGAGACAAATCTGGATTTTATGATTGTAGGTTTGTGGGATATCAAGATACATTATGGGATGTGGAAGGTCGTCATTATTTCAAAAATTGCATTATCGAAGGTGCTGTAGATTTTATATTTGGTAGTGGTCAATCTTATTTCGAGGTATTTATATATATTATTATTATTACATGTGATGAGAATTTTGATTTGACTTAG 669 0.3423 MNLFHFLFLPLLLLVSLFCYISVSLAQNCNSKISRTIIVDQSGKSKFKTVQSAIDSIPENNNQWVKIHINAETYKEKVHIPCQKPCIFLEGEGIDVTTITYNDHQSTDQSATFSSSPDNVVASKITFKNSFDVGKMLSLKEIKDGNYAVPALSARIYGDKSGFYDCRFVGYQDTLWDVEGRHYFKNCIIEGAVDFIFGSGQSYFEVFIYIIIITCDENFDLT* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3871 222 SUPERFAMILY Pectin lyase-like 33 205 IPR011050 -
Ahy3g3871 222 ProSitePatterns Pectinesterase signature 2. 189 198 IPR033131 -
Ahy3g3871 222 Gene3D - 29 215 IPR012334 -
Ahy3g3871 222 Pfam Pectinesterase 37 204 IPR000070 GO:0030599|GO:0042545
Ahy3g3871 222 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 206 - -
Ahy3g3871 222 PANTHER PECTINESTERASE 2 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3871 Ahy-Chr3 138100067 138101912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3871 4 205 Carbohydrate Esterase AT2G19150 44.554 1.40e-52 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3871 - - ahf:114927497 438.343