Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3849 ATGGATTCCCATAATGAAGCAATTCCACATGCTCCTACTAGGAGTGATTCTGATGATGATGTCATAGTAACCGTCATGGAAGCTTTGAACATTTCAAGAAGAAGTAATAGTGGTGGGAGAGAAGAAGAGGTTCCAATATACATGACATGGAAGGATATATGGGTGAGAGCTTGGGTGGGAAAGAATGAGAGCAAATCAATCCTTGAGGGTCTGACTGGTTATGCCAAGCCAGGCCAGCTTTTGGCCATTATGGGTCCTTCTGGATCTGGCAAGTCTACTCTTCTTGATGCTTTGGGAGGGAGATTAAGTTCAAACACAAGACAAACAGGGGAGATTCTAATCAATGGTCACAAGCAATCATTGGCTTATGGAACCACGGCATACGTGACACAAGATGATAGCTTAATAACATCATTAACAGTGAGAGAAGCAGTGTACTATTCAGCTCAGCTTCAGTTACCTGATTCCATGTCAAAGGCAGAGAAGAAAGAGAGAGCAGAGTTCACAATCAGAGAGATGGGTTTGCAAGATGCCATCAACACTAGAATTGGTGGCTGGGGTTGCAAAGGAATCAGCGGTGGTCAGAAGAGACGTGTAAGCATCTGCATTGAGATATTAACACGCCCAAGGCTCTTGTTTCTTGATGAACCAACAAGTGGACTTGACAGTGCTGCCTCTTACTATGTCATGAAAAGAATCAAATCCCTTGATCATAAAGATGGTATTCAAAGGACTATCATAGCGTCAATTCATCAACCAAGTGCTGAAGTTTTCCAATTCTTTGATAATCTCTGTTTGCTCTCTGCTGGAAAAACAGTTTACTTTGGACCTGCTTCTGATGCAATTCAGTTTTTCGCTTCCAATGGTTTTCCTTGTCCTGCTCTTCAAAACCCCTCAGATCATATGCTAAAAACTATAAACAAGGACTTCGATCAGGAAAATGAGCTGGGTCCTGATGATGGTGGGAATGGAATCATACCAACAGAAGAAGTAATCCGGATTCTTGTAAACTCATATAACTCATCTGAGATGAACCAACAAGTTCAAGCTGAAGTAGCAATGCTTTCTGAAACGGAAAGTATTTGCCAAGACAAGAAAAGAAGTCATGCTGGGTTTATTAGTCAGTGCATTGTTCTGAGCAAAAGATCATTCATAAACATGTTTCGTGATTTAGGCTATTACTGGATACGCCTTGTCGCATATATGGGGATGGCTATTTGTTTAGGAACTGTCTTCTATGATATAAGAACCACCAATAACTCAATTAAGGACAGAGGTTCATTTCTTACATTTGTGTCTACATTCATGACTTTCATGAGCATCGGTGGATTCCCTTCCTTTGTAGAAGATATGAAGGTATTTGAACGAGAAAGGCTAAATGGGCATTATGGTGTGTGCGCCTTTGTAATTGGAAACACATTTTCCGGCATCCCATTCGTATTACTAGTTTCATTGATTCCGGGAATAATTGCATATTACCTAGCTGGCCTTCAACATGGATACGAGCACGTTCTTTACTTCTTGAGCGTCTTGTTATCTTGTGTTATGTTAGTGGAAAGCCTCATGATGATAATTGCTGCCATAGTCCCAAACTACCTATTGGGAATCATGACAGGTTCTGCAATCCAAGGACTCATGATTCTCCTTGCTGGCTTCTTTAAATTGCCCAGTGACATTCCTAGGCCACTTTGGAAATACCCTTTGCACTACATCGCTTTCCATCGATATGCCTTTCAAGGATTGTTCAAGAATGAATTTCAAGGCCTAAAGTTTGGTACCAAAAACAACAATGTTATTACTGGTGAGGAGATTCTGAGGGATACATTTGAAGTGGACAACAGTTACTCAAAGTGGGTTGATCTATCAGTGTTGGTGGGGATGCTTGTTTTGTATCGAGTTCTGTTTTTGGTAATCATTAAGGGTACGGAGAAGGTTAAGCCTTTTGTTGCATCCTTCAAACTGGTGTCTCCCAAGAAAACAATACATGTCATGGAAAATCCAAATGCCACCCCTCCTACCCACGGACACTACCTTCTATAA 2040 0.4113 MDSHNEAIPHAPTRSDSDDDVIVTVMEALNISRRSNSGGREEEVPIYMTWKDIWVRAWVGKNESKSILEGLTGYAKPGQLLAIMGPSGSGKSTLLDALGGRLSSNTRQTGEILINGHKQSLAYGTTAYVTQDDSLITSLTVREAVYYSAQLQLPDSMSKAEKKERAEFTIREMGLQDAINTRIGGWGCKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMKRIKSLDHKDGIQRTIIASIHQPSAEVFQFFDNLCLLSAGKTVYFGPASDAIQFFASNGFPCPALQNPSDHMLKTINKDFDQENELGPDDGGNGIIPTEEVIRILVNSYNSSEMNQQVQAEVAMLSETESICQDKKRSHAGFISQCIVLSKRSFINMFRDLGYYWIRLVAYMGMAICLGTVFYDIRTTNNSIKDRGSFLTFVSTFMTFMSIGGFPSFVEDMKVFERERLNGHYGVCAFVIGNTFSGIPFVLLVSLIPGIIAYYLAGLQHGYEHVLYFLSVLLSCVMLVESLMMIIAAIVPNYLLGIMTGSAIQGLMILLAGFFKLPSDIPRPLWKYPLHYIAFHRYAFQGLFKNEFQGLKFGTKNNNVITGEEILRDTFEVDNSYSKWVDLSVLVGMLVLYRVLFLVIIKGTEKVKPFVASFKLVSPKKTIHVMENPNATPPTHGHYLL* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3849 679 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 14 671 - -
Ahy3g3849 679 Pfam ABC-2 type transporter 251 306 IPR043926 GO:0140359
Ahy3g3849 679 ProSitePatterns ABC transporters family signature. 191 205 IPR017871 GO:0005524
Ahy3g3849 679 Pfam ABC transporter 70 219 IPR003439 GO:0005524
Ahy3g3849 679 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 48 294 IPR003439 GO:0005524
Ahy3g3849 679 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 286 IPR027417 -
Ahy3g3849 679 SMART AAA_5 77 271 IPR003593 -
Ahy3g3849 679 Pfam ABC-2 type transporter 375 586 IPR013525 GO:0016020|GO:0140359
Ahy3g3849 679 Gene3D - 49 315 IPR027417 -
Ahy3g3849 679 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 14 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3849 Ahy-Chr3 137890808 137896381 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3849 78 233 Calmodulin-binding Proteins AT2G36910 30.539 6.10e-10 60.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4123 13 140742669 140747669 Ahy3g3849 3 137890808 137896381 hybridization